Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241877g00005 ATGGAACTCTTCTCTACCCAAACCCTTCTTCTCTTCCTCTCCTTTCTCACCTTTATTTACCTCCACCACCGAAAACCCAAAACTGCACCTACAGGCTTCAAAGCCTACCCTATCGTGGGCACACTTCCCGACTTCCTCCTCAACCGCCATCGCTTCCTCGACTGGAGCACCGATGTCCTCCGCAACTGCCCCACCCACTCCGCCGTCTTCAAACGCCCCGGTAAGGTCCACGGCATCATGACAGCCAACCCGGACAACGTCGAACACGTACTCAAAACCAATTTCCATAACTACCCCAAGGGTGAACGCTTCATCTACCTCCTCCGAGACTTCCTTGGCCAAGGAATCTTCAACTCCGACGGCGATCTCTGGAAACTCCAACGCAAAACCGCTAGCTACGAGTTCAACACTAAATCGCTCCGAAATTTTGCCATCCAAAACGTCACCGTGGAGATCCAAACGAGGCTCATTCCGTTGCTCCAAAGAGCTTCCGAATCTGAAACCATCCTCGACTTGCAAGACGTTCTTGAGCGCTTCGCCTTTGACAACATTTGCAAGCTAGCCTTCAACGTCGACCCCGTGTGCCTCGCCGCCGAAGGCTCTGGCGATGCCACGGTCGGCGGCGAATTCATGCGCGCGTTCGAGGATGCCGCTGCACTCAGCTCCGGGAGGTTTATGAGCGTGTTTGAGTGGGTATGGAGGCTCAAGAAGTTCCTCAACGTTGGAAGCGAAAAGAGGCTTAGGGAATCAATCTCCATCGTACACGCGTTCGCTGATAAGATCATACGGTCCAGAATGGAAAGAAAGGATGACGCTAACGATAACGTGGACCTCTTATCGCGGTTCATGGCCACAGAGGATAACTCCCCTGAGTTTCTCCGTGATATTGTTATAAGCTTAATTTTGGCGGGACGTGATACGACGTCGTCTGGGCTGAGTTGGTTCTTTTGGATTCTCTCTTCAAGACCTGACGTCAAGGATAAAATAGTCAAAGAAATTGAAACCGTTCGCGTCACGAGCGAAAAGCGTGATTCTGGTGAAGCAGGGTTTGGGTACGAAGAGTTGAAGGAGTTAAAATACTTACACGCGGCTATTTCAGAATCAATGAGGTTGTATCCTCCGGTGCCTGTAGACACTATGGCGTGCTTGAACGAGGACGTTTTGGCGGACGGTACGCGTGTTAAGAAGAAATGGTTTGTGACGTATCATACTTACGCGATGGGGAGGATGGAGAGTATTTGGGGGAGTGATTGGGCGGAGTTTAAACCGGAAAGGTGGTTTGATGAGGATAGTGGGGTTGTTCGAACCGAAAGCCCGTTTAGGTATCCGGTTTTTCATGCTGGAGCGAGGATGTGTTTGGGTAAGGAGATGGCTTATATTCAAATGAAGTCTATTGTGGCATCGGTGATGGAGAGGTTTGNNNNNNNNNNCAATGCTGTGGATAAGGACACGTGTCCAGAGCAGCATTTGTCCTTGACCTTGAGGATCAAAGGTGGGTTGCCAGTGCGAGTCAGGCCAAGAGATAGTGCGTGA 1533 0.5049 MELFSTQTLLLFLSFLTFIYLHHRKPKTAPTGFKAYPIVGTLPDFLLNRHRFLDWSTDVLRNCPTHSAVFKRPGKVHGIMTANPDNVEHVLKTNFHNYPKGERFIYLLRDFLGQGIFNSDGDLWKLQRKTASYEFNTKSLRNFAIQNVTVEIQTRLIPLLQRASESETILDLQDVLERFAFDNICKLAFNVDPVCLAAEGSGDATVGGEFMRAFEDAAALSSGRFMSVFEWVWRLKKFLNVGSEKRLRESISIVHAFADKIIRSRMERKDDANDNVDLLSRFMATEDNSPEFLRDIVISLILAGRDTTSSGLSWFFWILSSRPDVKDKIVKEIETVRVTSEKRDSGEAGFGYEELKELKYLHAAISESMRLYPPVPVDTMACLNEDVLADGTRVKKKWFVTYHTYAMGRMESIWGSDWAEFKPERWFDEDSGVVRTESPFRYPVFHAGARMCLGKEMAYIQMKSIVASVMERFXXXXNAVDKDTCPEQHLSLTLRIKGGLPVRVRPRDSA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241877g00005 510 PANTHER CYTOCHROME P450 19 502 - -
Stsc241877g00005 510 SUPERFAMILY Cytochrome P450 20 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241877g00005 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Stsc241877g00005 510 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241877g00005 510 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241877g00005 510 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241877g00005 510 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241877g00005 510 CDD CYP86A 69 500 - -
Stsc241877g00005 510 Gene3D Cytochrome P450 21 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241877g00005 510 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241877g00005 510 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241877g00005 510 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241877g00005 510 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241877g00005 510 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241877g00005 510 Pfam Cytochrome P450 30 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241877g00005 Stsc-Chr241877 47324 49192 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241877g00005 25 507 Cytochrome P450 AT3G56630 60.537 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241877g00005 - - gmx:100812147 707.983