Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241876g00005 ATGGAAACTGGTGTTTACACTGGTTACTCTTTGCTCTCTACTGCCCTTGCTCTTCCACATGATGGAAAGATATTGGCCATGGATGTGAACCGGGAGTATTATGAACTTGGATTGCCCATAATTGAAAAAGCTGGAGTAGCTCACAAAATTGATTTCAGAGAAGGACCTGCTGTTCCTCTTCTTGACCAATTGTTAATAGATGAACATAACAAGGGGGCATTTGATTTTGTGTTCGTGGATGCGGATAAGAACAACTACTTGAACTACCATAAGAGAGTGATTGAGCTTGTGAAAGTTGGGGGATTGATTGGCTACGATAACACTCTATGGAGTGGTTCTGTGGCGAGCCCACCTGATGCACCAATGATGGATTATGTCAAGGAGTTTCGCAGTTATCTCGTAGAGCTCAACAAGTACCTCGCGCACGATTCAAGGATTGAGATTTGTCAACTCCCTGTTGGTGATGGCATTACCCTGTGCCGCCGCATCATGTGA 495 0.4444 METGVYTGYSLLSTALALPHDGKILAMDVNREYYELGLPIIEKAGVAHKIDFREGPAVPLLDQLLIDEHNKGAFDFVFVDADKNNYLNYHKRVIELVKVGGLIGYDNTLWSGSVASPPDAPMMDYVKEFRSYLVELNKYLAHDSRIEICQLPVGDGITLCRRIM 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241876g00005 164 Pfam O-methyltransferase 1 163 IPR002935 GO:0008171
Stsc241876g00005 164 PANTHER O-METHYLTRANSFERASE-RELATED 1 163 - -
Stsc241876g00005 164 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 163 IPR002935 GO:0008171
Stsc241876g00005 164 Gene3D Vaccinia Virus protein VP39 1 164 IPR029063 -
Stsc241876g00005 164 CDD AdoMet_MTases 5 103 - -
Stsc241876g00005 164 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 162 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241876g00005 Stsc-Chr241876 36153 38339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241876g00005 1 163 Monolignol Biosynthesis Gene Families AT4G34050 76.687 1.82e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241876g00005 K00588 - gmx:100795858 291.582