Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241870g00007 ATGGATGAAAAATTTGAAACTGCTGACAAAAAGGTGCTGGTTGATATTGTTAAATTGGCACAAAAGAGAGGACTGAAAGGTGAATTTGGAGACTGGAAAGAATTCTTGAACAGTCATGATAAAAAGTTTGGGGCAGGATTGAGTGACCCATCAAAGAGGTCCCATGAGGTCTTGGCCGCATTCCTGAAAACATTTTCAAAGGAGGATGATTTGAAGTATTTACTGGAGCAATTGAAAGATAGTTCACATGTTTCTCCCTATCAGAGTCTAGTCCAAATAACTCTTCGGCACCCGTTATATCCATTGGATTATTCATTTCCATCAGTTGATGAGGGATGGATAATTTTAAACCTTAAGAAAAAAAAGGTAATGAAGTCAACTCAAATATTTGCTGTTGATTGTGAAATGGTTCTCTGTGAAGATGGGACTGAAGCAGTAGTAAAAGTATGCGTGGTAGACCATAATTTAGAGGTCAAGCTAAATGAACTTGTAAAACCTGGGAAAGCAATTGCAGACTATAGAACAGAGATTACTGGTATTTCTTCTCAAGATCTCGAGGCAGTCACATGCTCCTTACCTGATATACAGAAATCAATGAAGAAGTTGTTAGAAAATGGAGCCATATTAGTGGGACACAGTTTGCATAATGATCTCCGTGTGCTGAAGATAGATCATGTTAGAGTGGTTGACACTGCGTATATCTTCCAATCCTCAGATGGATCAATTCACAAGAGACCTTCTTTAAATAATTTGTGCAAGACTGTGTTAGGTTATGAAGTTCGGAAAGATGGAGCTCTGCATAATTGTCTAGACGATGCACGTGCAGCAATGGAACTTTTACTTGCAAGGGTTAAGAATGGCGTTGATAAAGATTTTCCCGTTCAACTTCAAGAGCCAATAAGCTTACATATAGGTGGGGTGCGGCGAACTGCAACAATGGTCACAGTTCGCCGAGACACTAGGCGAACTGTGACCACCTTTGCATGCTTTAATGTACGAAGTATCAGAGTGGTCACAATTCGCCCAATATCTAGGCAAATTGTGACCATCTTTCACCTATAA 1062 0.3964 MDEKFETADKKVLVDIVKLAQKRGLKGEFGDWKEFLNSHDKKFGAGLSDPSKRSHEVLAAFLKTFSKEDDLKYLLEQLKDSSHVSPYQSLVQITLRHPLYPLDYSFPSVDEGWIILNLKKKKVMKSTQIFAVDCEMVLCEDGTEAVVKVCVVDHNLEVKLNELVKPGKAIADYRTEITGISSQDLEAVTCSLPDIQKSMKKLLENGAILVGHSLHNDLRVLKIDHVRVVDTAYIFQSSDGSIHKRPSLNNLCKTVLGYEVRKDGALHNCLDDARAAMELLLARVKNGVDKDFPVQLQEPISLHIGGVRRTATMVTVRRDTRRTVTTFACFNVRSIRVVTIRPISRQIVTIFHL 353
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc241870g00007 353 SUPERFAMILY Ribonuclease H-like 129 284 IPR012337 -
Stsc241870g00007 353 Gene3D - 124 296 IPR036397 GO:0003676
Stsc241870g00007 353 Pfam Exonuclease 131 280 IPR013520 -
Stsc241870g00007 353 SMART exoiiiendus 128 289 IPR013520 -
Stsc241870g00007 353 FunFam Small RNA degrading nuclease 3 124 298 - -
Stsc241870g00007 353 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 25 295 IPR047021 GO:0004527
Stsc241870g00007 353 CDD REX1_like 130 281 IPR034922 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc241870g00007 Stsc-Chr241870 50006 60563 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241870g00007 73 279 C2H2 Transcription Factor Family AT2G48100 29.680 3.43e-10 58.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241870g00007 K14570 - gmx:100785565 485.337