Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241869g00012 ATGTCTAACACCGACGGAAACTCTAACGCCGTTACCAACATTGACACGCACCGTCACCACTCACAGTCACAGCAGCCACCAACTAACGGCGCCCTCGTCGTCAAAAAGCCACCATCCAAAGACCGACACAGCAAGGTCGACGGACGCGGCCGACGTATTCGGATGCCTATCATCTGCGCCGCCCGCGTCTTCCAGCTCACCCGCGAGCTCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTACTCCGCCAGGCCGAGCCCTCCATCATCGCCGCCACCGGAACTGGAACTACTCCCGCCAGCTTCTCCTCCGTCTCCGTCTCCGTACGCGGCGGCGCTGGCTCTCTATCCTCTCCTTCTTCAACCTCCGCTGCTTCTTCGCTCGACCACAAGCCCTTGCTCGCTCCTACTCCCTTCATACTCGGCAAGCGCATACGCACCGACGACGACGCTTCCGCCAAGGACGACGGCGTCTCCGTGGGGCCCGCCGTGGGGTCCTTAGTGGGCCCAGGAGGTCCGGCTGGGCTCTGGGCCCTCCCGGCCAGGCCCGATTTCGGTCAAATTTGGAGTTTCGCTGCGGCTGCTCCTCCGCCGGAGATGGTTGTGCAGCCGGCGGCGGTGTCGGTGTCTCAGCAGCAGCAAGCTTCTTTGTTCGTTCATCATCAGCATCAGCATCAGCAGCAGCAACAAGCCATGGGAGAAGCTTCGGCGGCGAGGCTGGGAAATTACCTTCCTGGACATCTGAATTTGCTGGCTTCTTTGTCGGGAGGGCCCGGAAATTCCGGCCGGAGAGATGATGAGCCTCGCTGA 813 0.6199 MSNTDGNSNAVTNIDTHRHHSQSQQPPTNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGAGSLSSPSSTSAASSLDHKPLLAPTPFILGKRIRTDDDASAKDDGVSVGPAVGSLVGPGGPAGLWALPARPDFGQIWSFAAAAPPPEMVVQPAAVSVSQQQQASLFVHHQHQHQQQQQAMGEASAARLGNYLPGHLNLLASLSGGPGNSGRRDDEPR 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241869g00012 270 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 242 IPR005333 GO:0003700
Stsc241869g00012 270 Pfam TCP family transcription factor 39 200 IPR017887 -
Stsc241869g00012 270 MobiDBLite consensus disorder prediction 36 51 - -
Stsc241869g00012 270 ProSiteProfiles TCP domain profile. 39 93 IPR017887 -
Stsc241869g00012 270 MobiDBLite consensus disorder prediction 110 130 - -
Stsc241869g00012 270 MobiDBLite consensus disorder prediction 1 30 - -
Stsc241869g00012 270 MobiDBLite consensus disorder prediction 1 51 - -
Stsc241869g00012 270 MobiDBLite consensus disorder prediction 110 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241869g00012 Stsc-Chr241869 53609 54421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241869g00012 24 270 TCP Transcription Factor Family AT5G23280 65.600 2.96e-95 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc241869g00012 TCP 2.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241869g00012 K16221 - qsa:O6P43_020036 363.229