Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241864g00004 ATGGATGCTGGCTGCTTAAGCGAAGAAAATATAGGATATGATAATGCTTCTAGAACTGAACAAAAGCGTGGTCATCAGTGGTTTATGGATTCGGGTGAACTGCAAGTATTCAACAACATTAAGAGGCAGGCAGTTGAATCTGTTAATGGCAATCCAGTTTCAGGAGTTTCTCATGTAAATATTTCTCCATGGGACATTAATTCAGGATTTCATTCAGTTACAGGACAATTTTCTGATCGGCTCTTTGGGTCTGAGCTACGAGCTGTCAATATGGTTGATAAGAACATGGCATCAATAAGAAGTGGAAACTTGAACATAGGAAGCAAGGATTTTGAGAATCAATATGGTAATGATCCATCAGTGGGGTTATCAATATCCCATAACATTGAGGACCCTTCACCATGTCTCAATTTTGGTGGTATCAGAAAAGTCAGAGTTAATGAAGTAAGAGATTCTGACAGCTGCATGCCTTCATCCATGGGGAACTCCTACGGTAGGGCTGATAATAGTTTAATATCAATTGGTTCTGGGTATAGTAAGAATGATGGTAACATATCATTGGGCACTACCTATAACAACATAAATGATAATTCCATCTCTATGCAGACCTCAATAAGTAAGACCAATGGCAACCTTGTTCCAATGGATCATGCCTTAAGTAAAGGGGATGGTAGTTTTATGTTGATGGGGCACAACTATGGCAAAGGGGATGAAAATATTTTATCAATGAATCAACCCTTTGACAGGGGAGATGGAACTTTCATATCAATGGGCCACACATATGACAAGGACGACAGCAATATGATATCTCTGGGTACCTCTTATAACAAGGGGCATGACAACTTTATATCAATGGGTCCAACCTACAGTAAATCTGCAGAAAATTTCATAAATATTGGTGCTTCATATGACAAGGGCACTGGTCATATAATGTCGATAGGTACAACATATGATAATGTAGATTCAAACATTGCATCAACAGTTCGTTTGTATGAGAATGGAGATTCCAACTCCTTGTCAGTGGCCCAAAATCATAGTAAGGGTGAGGCAAGTACAATATCTTTTGGAAGTGTTCAAAAGGGCTGTGAGCAAAATCTTAATGGAGGCATCATTAGTGGCTATGATCTTTCAATGGGCAACCAGACTTCACCTCATGGTTTGGATGGGCAGAAGGCTGTGAGTGAGTCAAACTCTGAACTGCCTACGGATAGTACTCCGAAATCCAATCCTTGTACCGATTCTACCCTTAAGAATAAATATCCAAAGACAACCAAGAAGGCTTCTGCTAACAACTTTCCTTCCAATGTTAAAAGTTTGTTATCAACTGGTATTTTTGATGGCGTTCCTATTAAATATGTATCCTGGTCAAGAGAGAGAACTCTCAGAGGAATCATAAAGGGAACTGGATATTTGTGTTCATGTGATGACTGCAAACAGTCCAAGGTTCTCAATGCTTATGAATTTGAGTGTCATGCTGGTGCCAAGACCAAACACCCTAACAATCACATATATTTTGACAATGGTAAAACCATCTATGCTGTTGTTCAAGAGCTGAAAAGCGCTCCTCAGGAGATGCTTTTTGATGCAATTCAAAGTGCGACTGGCTCTTCCATTAACCATAAAAACTTCCGCATTTGGAAAGCATCATATCAAGCTGCAACTCGGGAGCTTCAGCGTATCTATGGAAAGGACGAAGTTGTCGTACCATCTTGA 1713 0.3975 MDAGCLSEENIGYDNASRTEQKRGHQWFMDSGELQVFNNIKRQAVESVNGNPVSGVSHVNISPWDINSGFHSVTGQFSDRLFGSELRAVNMVDKNMASIRSGNLNIGSKDFENQYGNDPSVGLSISHNIEDPSPCLNFGGIRKVRVNEVRDSDSCMPSSMGNSYGRADNSLISIGSGYSKNDGNISLGTTYNNINDNSISMQTSISKTNGNLVPMDHALSKGDGSFMLMGHNYGKGDENILSMNQPFDRGDGTFISMGHTYDKDDSNMISLGTSYNKGHDNFISMGPTYSKSAENFINIGASYDKGTGHIMSIGTTYDNVDSNIASTVRLYENGDSNSLSVAQNHSKGEASTISFGSVQKGCEQNLNGGIISGYDLSMGNQTSPHGLDGQKAVSESNSELPTDSTPKSNPCTDSTLKNKYPKTTKKASANNFPSNVKSLLSTGIFDGVPIKYVSWSRERTLRGIIKGTGYLCSCDDCKQSKVLNAYEFECHAGAKTKHPNNHIYFDNGKTIYAVVQELKSAPQEMLFDAIQSATGSSINHKNFRIWKASYQAATRELQRIYGKDEVVVPS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241864g00004 570 PANTHER AUTOIMMUNE REGULATOR 7 548 - -
Stsc241864g00004 570 Pfam Tify domain binding domain 463 518 IPR032308 -
Stsc241864g00004 570 SUPERFAMILY Porins 62 341 - -
Stsc241864g00004 570 MobiDBLite consensus disorder prediction 381 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241864g00004 Stsc-Chr241864 15954 19443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241864g00004 422 551 PHD Transcription Factor Family AT3G53680 54.615 9.67e-40 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241864g00004 - - gmx:100782217 838.18