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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Stsc241864g00001
ATGGTGAAGATGATGGAATGGCAGAAGCAGTTGCATAATAATAATGAGAAGGGAGACAACAATAACAATAACAATAACATGATGTATGTGAAGGTCATGACTGATGAACAGTTAGAAACTCTCAGGAAGCAGATTGCAGTTTATGCCACTCTCTGTGAACAGCTCGTTGAGATGCATAGAACCCTCTCCACTCACCACGATCTTGCAGGAGTTCGGGTGGGAAATATATACTGTGATCCATTGATGACATCATCAGGGCAGAAAATAACATCTAGGCAGAGGTGGACACCAACACCATTGCAGCTTCAAATTCTTGAGCGAATATTTGATCAAGGGAATGGAACTCCCAGCAAGGAGAAGATTAAAGAGATCACTGCTGAACTTAGCCACCATGGCCAGATTTCTGAAACAAATGTATACAATTGGTTCCAGAATAGGCGTGCAAGATCAAAGAGGAAGCTTCAAAACAATGTGGCACCTACTACTGTTATTGAATCAGAGGTAGATGCTGAGGTTGATTCCAAGGATAAGAAGACAAAGCCAGAGGAGTTAATTAGTTCCCAACAACAACATACTACTCGGTCAGAAAAGTTGTGCTTTCATCAGAACAATGAGTTGCACTACTTGAATCAACATTCAAACAACAACAACAGCAAATCAGATCCCATTTTCACAAGAAATTTTAGTCGTATGCCTGTTTTTGATGATGTTCTATCAAACTCAAGGGGAGACTATCTAGATGGAAAAATGGAAGTAGGTGGTGGTGGGATGTATAATTTATATCAGCAAGCAGGGGACTATAATTTGGGGGGTTGA
816
0.4056
MVKMMEWQKQLHNNNEKGDNNNNNNNMMYVKVMTDEQLETLRKQIAVYATLCEQLVEMHRTLSTHHDLAGVRVGNIYCDPLMTSSGQKITSRQRWTPTPLQLQILERIFDQGNGTPSKEKIKEITAELSHHGQISETNVYNWFQNRRARSKRKLQNNVAPTTVIESEVDAEVDSKDKKTKPEELISSQQQHTTRSEKLCFHQNNELHYLNQHSNNNNSKSDPIFTRNFSRMPVFDDVLSNSRGDYLDGKMEVGGGGMYNLYQQAGDYNLGG
271
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Stsc241864g00001
271
Pfam
Homeodomain
92
152
IPR001356
GO:0003677
Stsc241864g00001
271
PANTHER
WUSCHEL-RELATED HOMEOBOX 13
5
263
IPR044559
GO:0003700
Stsc241864g00001
271
ProSiteProfiles
'Homeobox' domain profile.
88
153
IPR001356
GO:0003677
Stsc241864g00001
271
MobiDBLite
consensus disorder prediction
169
194
-
-
Stsc241864g00001
271
CDD
homeodomain
92
153
IPR001356
GO:0003677
Stsc241864g00001
271
MobiDBLite
consensus disorder prediction
169
184
-
-
Stsc241864g00001
271
SUPERFAMILY
Homeodomain-like
90
156
IPR009057
-
Stsc241864g00001
271
Gene3D
-
93
158
-
-
Stsc241864g00001
271
SMART
HOX_1
90
157
IPR001356
GO:0003677
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Stsc241864g00001
Stsc-Chr241864
1683
3715
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Stsc241864g00001
4
271
Wox Gene Family
AT4G35550
46.980
2.36e-80
241
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-WOX
Stsc241864g00001
Homeodomain
9.2e-19
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Stsc241864g00001
-
-
ahf:112777216
439.884
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