Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241863g00010 ATGGCTTCTAACACATTGATGAGTTCTACTATATCAGCTTTCCCATCTCTTCTTTCTTCCTCAAAGTCAAGATTTGCTACTTCAGTTCCAATCTCATGCTTTGGTACTACCAATGTGTCTTCTCGCTTCTCCATGACTGCTGACTGGATGCCAGGCCAGCCTAGACCCCCTTACCTTGATGGCTCAGCTCCAGGTGACTTTGGATTTGACCCTCTTCGTCTTGGAGAAGTACCTGAGAATCTTGAGAGATTCAAGGAGTCAGAACTTATCCACTGCAGATGGGCTATGCTTGCTGTTCCAGGTATGTTGGTACCAGAGGCATTAGGCTTAGGCAATTGGGTGCAAGCTCAGGAATGGGCTGCCAAACCCGGAGGCCAAGCAACCTACCTTGGAAACCCTGTCCCATGGGGCACCCTCCCCACCATTTTGGTTATTGAATTCCTTGCTATTGCCTTTGTGGAGCACCAAAGGAGCATGGAGAAAGACCCTGAAAAGAAGAAATACCCTGGTGGTGCCTTTGATCCTTTGGGATACTCTAAGGATCCTAAGAAGTTCCACGAATACAAGATCAAAGAAATCAAGAATGGACGTCTTGCTTTGTTGGCTTTTGTGGGATTCTGTGTGCAACAATCAGCATACCCTGGGACTGGACCATTGGAGAACTTGGCTACTCACTTGGCTGATCCATGGCACAACAACATTGGAAATATCATCATTCCCTTTTAA 726 0.4669 MASNTLMSSTISAFPSLLSSSKSRFATSVPISCFGTTNVSSRFSMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGMLVPEALGLGNWVQAQEWAAKPGGQATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKIKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNIIIPF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241863g00010 241 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 46 237 IPR001344 GO:0009765|GO:0016020
Stsc241863g00010 241 Gene3D Chlorophyll a/b binding protein domain 50 236 - -
Stsc241863g00010 241 FunFam Chlorophyll a-b binding protein, chloroplastic 50 236 - -
Stsc241863g00010 241 Pfam Chlorophyll A-B binding protein 56 210 IPR022796 -
Stsc241863g00010 241 SUPERFAMILY Chlorophyll a-b binding protein 40 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241863g00010 Stsc-Chr241863 50964 52263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241863g00010 1 197 Chloroplast and Mitochondria Gene Families AT3G54890 79.899 3.92e-106 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241863g00010 K08907 - gmx:100305992 452.595