Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241863g00003 ATGGAAATTAAGATAACAAGTAGAGAAAGCATTAAGCCATCATTACCCACGCCTGAAGAACGCAGAAAACACAAACTCTGTTTATTTGATGTGTCTCAACTCAACACCTACTTCCCATTAATCCTATTTTTCCAAAAAGGATCCTCAAACATTTTACCACAATTGAAGAAATCACTATCCGAAGCACTAACAATTTTCTACCCTCTTGCAGGTAGAAAGAGTAGTGATGATCCCTTTTCAATCAATTGCAACGATGAAGGTGCTATCTTCATAGAGTCCAAAGTAGCGAACATCACCATGGAAGACTTCCTCAAACCACCAAAACTTGAATTGCTTAACAAACTGCTTCCTTGTGAGCCAAACAAGACTCACCCTAATTATGAAGTGTTGCCACAGTTGGTGATCCAAGCCAACACTTTCAAGTATGGTGGAATAGCTATTGGAATGTGCAATCTCCACAAACTCTTGGATGCATCTTCTTGTGTCACTTTCTTGAAGACTTGGTTCGCCATTTCTAGAGGCTCGGCGGAAGAGATATCATGGCCTGATTTCTCTTCCGCTCCCTCTTTGTTCCCGCCGATGATGAACCCTCCTGGCCTGATGCGCTCGGGGGTGCTCAACATCGGCAGGGACATACAAATTGAAACAATGTGCACAACAAGAAGATTCTTGTTTGATTTCAAAGCCATGAATGACCTCAGATCAAAGGCTACATTAGAAAGAATGATGAACACAAGACCTACGAGGTATCAAGCAGTTTCATCATTCATATGCAAACACATGATTATGTCATGCATGAAAGAAGAAGAAGAGAAGAGTAGGCCAGTGGTAGTGCTGCATGTTGTGGACATGAGGAGAAGAATGGGAGAACCGTTCTCACAAAACTCAATTGGGAACTTGCTGTGGCCAGCAGTGATGCTATGTGAGAATGTGAACAAGGACACTGAGATCAGTGAATTGGTTAAAGTCACAAAGTGTGGAATTGGGAAAGTGACAAGGGAATTGCTGGTGAGAGTTCAAAAGGATGACAGGTTTTGGTGGAGTGATGAATGTGGTGAGTTGATGCTTGAAGAGGTGGTGAACAAAGATCCGGTGTCGTTTTTGTTCACAAGTTGGGGTGATATGGGATTCAAAGACTTGGATTTTGGATTGGGAAAACCTTTGTGGTTGGCTCAGAAAGGTGGCAATGCTGAAACAATTCCAAACACAGTGGTATTCATGGACACAAAATATGGAATTGAGGCATGGATTTCAATGAGACCTCAACATATTGCTACATTGGAAAATGACGTGGATTTTCTCACTTTTGCTTTGCTTAATCCTACTGTTTCAACCATGAATTGA 1344 0.4174 MEIKITSRESIKPSLPTPEERRKHKLCLFDVSQLNTYFPLILFFQKGSSNILPQLKKSLSEALTIFYPLAGRKSSDDPFSINCNDEGAIFIESKVANITMEDFLKPPKLELLNKLLPCEPNKTHPNYEVLPQLVIQANTFKYGGIAIGMCNLHKLLDASSCVTFLKTWFAISRGSAEEISWPDFSSAPSLFPPMMNPPGLMRSGVLNIGRDIQIETMCTTRRFLFDFKAMNDLRSKATLERMMNTRPTRYQAVSSFICKHMIMSCMKEEEEKSRPVVVLHVVDMRRRMGEPFSQNSIGNLLWPAVMLCENVNKDTEISELVKVTKCGIGKVTRELLVRVQKDDRFWWSDECGELMLEEVVNKDPVSFLFTSWGDMGFKDLDFGLGKPLWLAQKGGNAETIPNTVVFMDTKYGIEAWISMRPQHIATLENDVDFLTFALLNPTVSTMN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241863g00003 447 Gene3D - 216 436 IPR023213 -
Stsc241863g00003 447 Gene3D - 1 198 IPR023213 -
Stsc241863g00003 447 PANTHER F21J9.9 4 437 - -
Stsc241863g00003 447 Pfam Transferase family 1 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241863g00003 Stsc-Chr241863 13319 14662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241863g00003 1 428 Monolignol Biosynthesis Gene Families AT5G48930 23.348 2.69e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241863g00003 - - gmx:102667966 573.163