Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241862g00008 ATGGCTGAGCTTTCCGCAAAGATCAAATCAATGGAATCCATCCGAGTCATCTCCACAAGCTTAGTCCAAGCACCAAATCAAAACGCTCAAGTCACGGAGTTAGTTGACGGAATCTTTATTGGTTGCACGCTCAACCACGCCGTTGCAGACGGCAAGTCGTTTTGGCATTTCGTCAATTCTTGGGCAGAAATCTCACGCAGCGGCTGTAACAAACCCTCAATACTCCCTTCCCTGGAACATGTCTTTCTTGTAAACGACGTTGAGCTTCCAATACGGTTCCCTTTCACAGAGAAAGACTTCGAAATCATACCCAATCCAAAACCGCCGCTACCAGAGAGGTTCTTCCACTTCACAAAGGAGAAAATAGCAATACTGAAAGCAAAAGCTAACAAAGAAGCTGGCACGGAGAAAATCTCTTCACTACAATCGCTTCTAACACATCTTTGGATCTCTGTTTTCTGTTGCAATAAGCGCGTGCATCTTCAAGATGAGGTTTCATACTTCCTTCAGGTTGGTGTTAGGCCAAGGTTGGTTCCACCGTTGCCGGAGAGATACTTCGGGAATGCGGCGACGTTCGACAGCGTGAGGATGAGAGCAAAGGAGCTTCTAGAAGGTGGGATTGGAAGGATTGCCTCCGAGATGAACAAGATGATAGCTTCGCACACTGATGAGAAGGTGAGGAGTCACTTTGAGTCTTGGCTGAGAAACCCAACTTTGTTGAATTCGCAGAAAGTGACTAATAGCACTTCCTTGGGGACTAGTAGCTCCCCGCGCTTCGATGTTTATGGTAATGATTTTGGGTGGGGAAAGCCGGTGGCGGTTCGGAGTAGCGTGTTTGCTGGGAAGGAAGAAGGGAGTATTGATCTTGAAGTGTGTCTTGCATATGACATCTTGGAGGCTTTAGGGAAAGACGCTGAGTTCACCATGGATTATGTTTCCATCTAA 945 0.4688 MAELSAKIKSMESIRVISTSLVQAPNQNAQVTELVDGIFIGCTLNHAVADGKSFWHFVNSWAEISRSGCNKPSILPSLEHVFLVNDVELPIRFPFTEKDFEIIPNPKPPLPERFFHFTKEKIAILKAKANKEAGTEKISSLQSLLTHLWISVFCCNKRVHLQDEVSYFLQVGVRPRLVPPLPERYFGNAATFDSVRMRAKELLEGGIGRIASEMNKMIASHTDEKVRSHFESWLRNPTLLNSQKVTNSTSLGTSSSPRFDVYGNDFGWGKPVAVRSSVFAGKEEGSIDLEVCLAYDILEALGKDAEFTMDYVSI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241862g00008 314 Gene3D - 9 90 IPR023213 -
Stsc241862g00008 314 Pfam Transferase family 15 284 - -
Stsc241862g00008 314 Gene3D - 96 303 IPR023213 -
Stsc241862g00008 314 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 19 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241862g00008 Stsc-Chr241862 32022 33348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241862g00008 37 272 Monolignol Biosynthesis Gene Families AT5G48930 28.112 1.80e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241862g00008 - - adu:107480292 362.844