Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241856g00014 ATGGGGAATCCTGTAATAGATGGAAATGTAGAAAACTATAGAATCCCATTTGCTCATGGGATGGGACTCATTTCTGATGAACTATACCAGTCACTGCTAAAACATTGTAAAGGAGAATACATAAATGTAGACAGCAGAAATGTATTGTGTTCAAGATATCTCAAGTCCTTTGATGAGACTTATGGATATCTCCTTAGTAGCTATTGGGCCAACGATGACAAAGTCCGCAATGCGCTTAATGTGCGAAAGGGAACTACAAGGGAATGGCGACGCTGCACCAAAGAAATGCCTTATGAGATTGATATCCCTAGCAGCCTTCCATATCAAGTAAATCTCAGCAAAAAAGGCTATCGTTCACTGATTTACAGTGGGGATCATGACATGATCGTTCCTTTCTTGGCGACTCAAGCAGAGATAAGATCGTTAAACTACTCCATTGTCGATGATTGGAGGCCATGGAATACTAATGGCCAAGTAGCAGGATACACAAGGACTTACTCCAATGCAATGACATTTGCAACTGTCAAGGGTGGAGGACACACAGCACCAGAGTACAAGCCTCAAGAATGTTTCCACATGTACACTAATTGGATCTCTGAGATGCCTTTTTAG 612 0.4167 MGNPVIDGNVENYRIPFAHGMGLISDELYQSLLKHCKGEYINVDSRNVLCSRYLKSFDETYGYLLSSYWANDDKVRNALNVRKGTTREWRRCTKEMPYEIDIPSSLPYQVNLSKKGYRSLIYSGDHDMIVPFLATQAEIRSLNYSIVDDWRPWNTNGQVAGYTRTYSNAMTFATVKGGGHTAPEYKPQECFHMYTNWISEMPF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241856g00014 203 FunFam Carboxypeptidase 105 200 - -
Stsc241856g00014 203 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 187 IPR001563 GO:0004185|GO:0006508
Stsc241856g00014 203 Pfam Serine carboxypeptidase 65 199 IPR001563 GO:0004185|GO:0006508
Stsc241856g00014 203 SUPERFAMILY alpha/beta-Hydrolases 2 202 IPR029058 -
Stsc241856g00014 203 Gene3D alpha/beta hydrolase 1 203 IPR029058 -
Stsc241856g00014 203 FunFam Carboxypeptidase 58 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241856g00014 Stsc-Chr241856 49756 51511 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241856g00014 57 203 Calmodulin-binding Proteins AT2G22960 61.486 3.49e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241856g00014 K16296 - gmx:100801015 298.13