Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241856g00013 ATGATTTCATCTCAGCTTGGACACTGTCGTACCGTTGTTAAGTACCTTCCGGGGTTCCAGGGACCACTTCCTTTTCTTCTTGAAACTGGGTATATAGGAGTAGGGGAAAATGATGATGTACAAACTTTTTACTACTTCATTGAGTCGGAGAACAATCCAAGGGAGGATCCTCTCATGCTATGGCTCACTGGTGGCCCTGGCTGCTCTGCTTTCTCTGGTCTTGTCTATGAAATAGGCAAGTAG 243 0.4568 MISSQLGHCRTVVKYLPGFQGPLPFLLETGYIGVGENDDVQTFYYFIESENNPREDPLMLWLTGGPGCSAFSGLVYEIGK 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241856g00013 80 Gene3D alpha/beta hydrolase 8 80 IPR029058 -
Stsc241856g00013 80 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 79 IPR001563 GO:0004185|GO:0006508
Stsc241856g00013 80 SUPERFAMILY alpha/beta-Hydrolases 13 79 IPR029058 -
Stsc241856g00013 80 Pfam Serine carboxypeptidase 17 79 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241856g00013 Stsc-Chr241856 47411 49202 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241856g00013 11 36 Calmodulin-binding Proteins AT2G22960 69.231 4.54e-08 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241856g00013 K16296 - gmx:100792006 130.954