Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241856g00009 ATGGCAACTTGTCACATGTTCCATAGCTTGCTAATTCCCATACTTGTATTATTAATACATTTTTCAGCTCAACATGCTAACTGTGGCAACATAGTGAAGTATCTTCCTGGGTTTGAGGGACCCCTTCCTTTTGTGCTTGAAACTGGGTACATAGGAGTGGGGGAGAATGATGATGTACAAACTTTCTACTACTTCATTGAGTCAGAGAACAATCCAAGGGAGGATCCTCTCATGCTATGGCTCACTGGTGGTCCTGGCTGCTCTGCTTTCTCTGGCCTTGTTTTTGAAATAGGACCACTTTCATTTCAATTTCATGATTATAATGGAGGACTCCCTACTTTGGTGTATAAACCATACTCCTGGACTAAGGTAAGTAGCATTCTATTTGTAGATATGCCTGTAAATACAGGCTTCTCATATGCCACAACAGAATCTGCATCTCACAGGACTGATTGGTCATTAGTTCACCAAACCCATCAATTTCTTAGGAAGTGGCTAATTGAGCATCCAGAATTTCTCACAAATGAACTTTACGTTGGTGGTGATTCATACTCCGGAATTCCTATTCCTGTAATTACTCACGAAATTTCTCAAGCAAATGAAGAAGGAATACAACCATGGATTAATCTTCAGGGATACCTGCTGGGGAATGCTGTAACAACCCGAACTGAAAAAAACTATGAAATCCCATTTTCTCATGGAATGGCACTTATTTCTGATGAACTATACCATTCATTGCAAAAAAATTGCAGAGGAGAATTTACAAATGTAGACATTGCAAACGTGTTATGTACCAAAGATCTAAAGTCCTATGATGATACCGTATCAGGACTTTATACAGGCCATACTTTGGATGCAAAATGTGAGTTTGGTTCGCCGAAGCCCTTCGATCTACCTTGGAAGAGATCTCTGATTGATAACTATTCTTCAGAGTCTAACAATAATCGGCTCACATTGCCACCTATAACTTGTCGAGTAGTCTTCCATGAATTATCAATAAGAGATGTTTCCTTAATGCTTCTTTTCTATATATTTTGCTATATGATCTCCTAG 1053 0.3903 MATCHMFHSLLIPILVLLIHFSAQHANCGNIVKYLPGFEGPLPFVLETGYIGVGENDDVQTFYYFIESENNPREDPLMLWLTGGPGCSAFSGLVFEIGPLSFQFHDYNGGLPTLVYKPYSWTKVSSILFVDMPVNTGFSYATTESASHRTDWSLVHQTHQFLRKWLIEHPEFLTNELYVGGDSYSGIPIPVITHEISQANEEGIQPWINLQGYLLGNAVTTRTEKNYEIPFSHGMALISDELYHSLQKNCRGEFTNVDIANVLCTKDLKSYDDTVSGLYTGHTLDAKCEFGSPKPFDLPWKRSLIDNYSSESNNNRLTLPPITCRVVFHELSIRDVSLMLLFYIFCYMIS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241856g00009 350 Gene3D alpha/beta hydrolase 26 293 IPR029058 -
Stsc241856g00009 350 SUPERFAMILY alpha/beta-Hydrolases 32 285 IPR029058 -
Stsc241856g00009 350 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Stsc241856g00009 350 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Stsc241856g00009 350 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Stsc241856g00009 350 Pfam Serine carboxypeptidase 36 274 IPR001563 GO:0004185|GO:0006508
Stsc241856g00009 350 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 304 IPR001563 GO:0004185|GO:0006508
Stsc241856g00009 350 FunFam Serine carboxypeptidase-like 19 25 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241856g00009 Stsc-Chr241856 31780 33561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241856g00009 24 55 Calmodulin-binding Proteins AT2G22960 71.875 1.68e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241856g00009 K16296 - gmx:100792006 456.832