Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241856g00007 ATGGCTACACAACATGGGGTCCTGCTTCTCCTTCTTTTGTTACTACTTCAGATTTCATCTCAAGTTGCATACTGTGGCAGCATAGTCAAGTACCTTCCAGGGTTCCAGGGACCCCTTCCTTTTGTGCTCCAAACTGGGTATATAGGAGTGGGTGAAAATGAAGATGTGCAGGCTTTCTACTATTTCATTGAGTCAGAGAACAATCCTAAGGTGGATCCTCTTATGCTGTGGCTCACCGGTGGACCAGGCTGCTCTGCTTTCTCTGGCCTTGTCTTTGAAATTGGACCACTTGCATTTCAAAATGAGGAATATAATGGAAGCTTGCCTAATTTGGTCTATAGGCCCTACTCATGGACAAAGATAAGTAGCATTATATTTGTAGATTTACCTGTTGATACCGGATTCTCATATGCAAGATCAGAATCCGTTACAGCGAGAAGCGACTCATTGCTAGTCAGCCAAACTCATCAATTTCTTAGGAAGTGGCTGAATGAGCATCCACAGTTTCTCTCAAATGAAGTTATCATTGGAGGCGATTCATACTCCGGTATTCCTATTCCAGTAATTGTTGATAAAATTTCACAAGATAATGAAGAAGGAGTCCAACCTTGGATAAATCTTCAGGGGTACCTGTTGGGGAATGCTGCAACAACTCGAATCGAGAAGAACTATCAAATCCAATTTGCTCATGGAATGGGACTAATTTCTGATGAACTATACCAGTCCCTTCAAAAAAACTGTGAAGGAGAATATATAAAAGATGACACTAGAAGTGCATTATGTTCAAGAGATCTCAACTCCTTTGATGAGATGAAATCAGGCATCAATACAGCCCATATTTTGGAACCTTCATGCCAATTTGGTTCACCTAAGCCATTGAAGGCTTCTTGGAGGCGATCTATAGCCGAAAACTATCCTTTGAAGCTTGTCAAAGACACTCGTCTCGGATTACCACCCTTGTACTGCCGGACTTATGGATACTTCCTTAGTAGATACTGGGCCAATGATGACAGTGTACAGAAAGCGCTAAACGTACGAAAGGGAACAAAAAAGGAATGGCAACGCTGCACCTACAATATACCTAACAAAGCGGATATCCCTAGCAGCTTTCCGTATCATGTAAAGCTCAGCAGAAAAGGATATCGTTCGCTGATATACAGTGGCGATCATGACATGAATATTCCTTTTATGGCGACTCAAGCGTGGATAAGATCTCTAAACTACTCAATCGTTGATGATTGGAGGCCATGGTATACAAATGGCCAAGTTGCAGGATACACAAGAACTTACTCCAATATGATGACATTTGCAACTGTCAAGGGTGGAGGGCACACAGCTCCTGAATACAAGCCTGAAGAATGCTTGGACATGTACAGTAGATGGATCTCTAACAGGCCATTGTAG 1404 0.4231 MATQHGVLLLLLLLLLQISSQVAYCGSIVKYLPGFQGPLPFVLQTGYIGVGENEDVQAFYYFIESENNPKVDPLMLWLTGGPGCSAFSGLVFEIGPLAFQNEEYNGSLPNLVYRPYSWTKISSIIFVDLPVDTGFSYARSESVTARSDSLLVSQTHQFLRKWLNEHPQFLSNEVIIGGDSYSGIPIPVIVDKISQDNEEGVQPWINLQGYLLGNAATTRIEKNYQIQFAHGMGLISDELYQSLQKNCEGEYIKDDTRSALCSRDLNSFDEMKSGINTAHILEPSCQFGSPKPLKASWRRSIAENYPLKLVKDTRLGLPPLYCRTYGYFLSRYWANDDSVQKALNVRKGTKKEWQRCTYNIPNKADIPSSFPYHVKLSRKGYRSLIYSGDHDMNIPFMATQAWIRSLNYSIVDDWRPWYTNGQVAGYTRTYSNMMTFATVKGGGHTAPEYKPEECLDMYSRWISNRPL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241856g00007 467 FunFam Carboxypeptidase 369 464 - -
Stsc241856g00007 467 SUPERFAMILY alpha/beta-Hydrolases 29 466 IPR029058 -
Stsc241856g00007 467 FunFam Carboxypeptidase 321 466 - -
Stsc241856g00007 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Stsc241856g00007 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Stsc241856g00007 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Stsc241856g00007 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Stsc241856g00007 467 FunFam Serine carboxypeptidase-like 11 23 467 - -
Stsc241856g00007 467 Gene3D - 325 467 - -
Stsc241856g00007 467 Gene3D alpha/beta hydrolase 25 291 IPR029058 -
Stsc241856g00007 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 451 IPR001563 GO:0004185|GO:0006508
Stsc241856g00007 467 Pfam Serine carboxypeptidase 33 464 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241856g00007 Stsc-Chr241856 24203 27250 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241856g00007 23 52 Calmodulin-binding Proteins AT2G22960 70.000 8.77e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241856g00007 K16296 - gmx:100792006 715.687