Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241856g00006 ATGGCAAGGTCGTATACAAGAAGTTATAGGATATCTGATTTCACATTTCATGGCGTCTTCCTACTTCCCCTTGTTTTGTTAACACTACAGTTTTCATCTCAGCTTGCAAACTGTGGCACCATAGTCAAGTATCTTCCAGGATTCCAGGGAGCCCTTCCCTTTCTCCTTGAAACTGGATATATTGGGGTGGGTGAAAATGATGATGTGCAGACTTTCTACTATTTCATTGAGTCTGAGAACAATCCTAAGGTGGACCCTCTCATTCTATGGCTCACCGGTGGTCCTGGTTGCTCTGCTTTCTCTGGCCTTGTCTTTGAAATTGGTCCTCTTATGTTTAGAAATGAAGAATATAATGGAAGTCTGCCTAATTTGTATTTGAAGCCACACTCTTGGACAAAGGTAAGCAACATTATATTTGTAGATTTGCCTGTTTTAACAGGCTTCTCTTATGCTAGAACAGATTCTGCTGCTCAACGAAGTGATTGGTTACTAGTTAATCAAACTCATCAATTTCTTAGGAAGTGGCTGATTGAACATCCAAAATTTCTTTCACATGAAGTTTACATTGGTGGTGATTCATATTCTGGTATTCCTATCCCAGCAGTTGTTCAAGAAATTTCACAAGGAAATGAAGAAGGGGTCCAACCATGGGTTAATCTCCAGGGATACCTGCTGGGAAATCCTGTAACAACCAGAAAAGAAAAGAACTATGCAATCCCATTTGCTCATGGAATGGCACTTATTTCTGATGAACTATACCATTCACTCCAAGAAAATTGTAAAGGAGACTATATAAATGTAGACACAGAAAATGTGTTATGTTCAAGAGACATTGCTTCCTACAATGAGGCTACAAAAGGACTCAATTCAGCACACACTTTGGATCCTTTATGCGAGTTCATCACTTTGCCTAAGCCGCGAAAAGTTTCTTGGAGGAGAGCTCTTACTGAGAAAAATGATCCCAGGAATTTCCTTGCTTCTCCCCTGACATTGCCGCCGTTAAGCTGCCGTAGTTATCCATACTTTCTTTGCACTTATTGGGCCAATGATGATAGTGTTCGCGATGCACTTAACATAAGAAAGGGAAGCATTGGCGAATGGCATCGCTGTACATGGAACATACCTCACAAGATGGAAATCTATAACAGCTTTGAGTATCATGTAAATCTCAGTCGAAAAGGCTATCGTTCACTGATATACAGTGGAGATCATGACTTGACGGTTCCTTTCTTGTCGACTCAAGCATGGATAAGATCCTTAAACTACTCCATTGTGGAAGATTGGAGACAATGGCATACTAATGGACAAGTTGCAGGATACACAAGGACTTACTCTAATAGGATGACATTTGCAACTGTGAAGGGTGGTGGGCACACAGCACCAGAGTTCAAGCCTGAAGAATGCTTTGCTATGTACACCAGGTGGATCTCTAAGAGGCCTTTGTAG 1446 0.4115 MARSYTRSYRISDFTFHGVFLLPLVLLTLQFSSQLANCGTIVKYLPGFQGALPFLLETGYIGVGENDDVQTFYYFIESENNPKVDPLILWLTGGPGCSAFSGLVFEIGPLMFRNEEYNGSLPNLYLKPHSWTKVSNIIFVDLPVLTGFSYARTDSAAQRSDWLLVNQTHQFLRKWLIEHPKFLSHEVYIGGDSYSGIPIPAVVQEISQGNEEGVQPWVNLQGYLLGNPVTTRKEKNYAIPFAHGMALISDELYHSLQENCKGDYINVDTENVLCSRDIASYNEATKGLNSAHTLDPLCEFITLPKPRKVSWRRALTEKNDPRNFLASPLTLPPLSCRSYPYFLCTYWANDDSVRDALNIRKGSIGEWHRCTWNIPHKMEIYNSFEYHVNLSRKGYRSLIYSGDHDLTVPFLSTQAWIRSLNYSIVEDWRQWHTNGQVAGYTRTYSNRMTFATVKGGGHTAPEFKPEECFAMYTRWISKRPL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241856g00006 481 SUPERFAMILY alpha/beta-Hydrolases 42 480 IPR029058 -
Stsc241856g00006 481 FunFam Carboxypeptidase 384 478 - -
Stsc241856g00006 481 FunFam Carboxypeptidase 335 480 - -
Stsc241856g00006 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Stsc241856g00006 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Stsc241856g00006 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Stsc241856g00006 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Stsc241856g00006 481 Gene3D alpha/beta hydrolase 38 304 IPR029058 -
Stsc241856g00006 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 465 IPR001563 GO:0004185|GO:0006508
Stsc241856g00006 481 Gene3D - 337 481 - -
Stsc241856g00006 481 Pfam Serine carboxypeptidase 46 477 IPR001563 GO:0004185|GO:0006508
Stsc241856g00006 481 FunFam Serine carboxypeptidase-like 11 36 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241856g00006 Stsc-Chr241856 19881 22794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241856g00006 36 65 Calmodulin-binding Proteins AT2G22960 66.667 5.46e-07 48.1