Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241856g00005 ATGGCAAGGTCGTATACAAGAAGTTATAGGATATCTGATTTCACATTTCATGGCGTCTTCCTACTTCCCCTTGTTTTGTTAACACTACAGTTTTCATCTCAGCTTGCAAACTGTGGCACCATAGTCAAGTATCTTCCAGGATTCCAGGGAGCCCTTCCCTTTCTCCTTGAAACTGGATATATTGGGGTGGGTGAAAATGATGATGTGCAGACTTTCTACTATTTCATTGAGTCTGAGAACAATCCTAAGGTGGACCCTCTCATTCTATGGCTCACCGGTGGTCCTGGTTGCTCTGCTTTCTCTGGCCTTGTCTTTGAAATTGGTCCTCTTATGTTTAGAAATGAAGAATATAATGGAAGTCTGCCTAATTTGTATTTGAAGCCACACTCTTGGACAAAGGTAAGCAACATTATATTTGTAGATTTGCCTGTTTTAACAGGCTTCTCTTATGCTAGAACAGATTCTGCTGCTCAACGAAGTGATTGGTTACTAGTTAATCAAACTCATCAATTTCTTAGGAAGTGGCTGATTGAACATCCAAAATTTCTTTCACATGAAGTTTACATTGGTGGTGATTCATATTCTGGTATTCCTATCCCAGCAGTTGTTCAAGAAATTTCACAAGGAAATGAAGAAGGGGTCCAACCATGGGTTAATCTCCAGGGATACCTGCTGGGAAATCCTGTAACAACCAGAAAAGAAAAGAACTATGCAATCCCATTTGCTCATGGAATGGCACTTATTTCTGATGAACTATACCATTCACTCCAAGAAAATTGTAAAGGAGACTATATAAATGTAGACACAGAAAATGTGTTATGTTCAAGAGACATTGCTTCCTACAATGAGGCTACAAAAGGACTCAATTCAGCACACACTTTGGATCCTTTATGCGAGTTCATCACTTTGCCTAAGCCGCGAAAAGTTTCTTGGAGGAGAGCTCTTACTGAGAAAAATGATCCCAGGAATTTCCTTGCTTCTCCCCTGACATTGCCGCCGTTAAGCTGCCGTAGTTATCCATACTTTCTTTGCACTTATTGGGCCAATGATGATAGTGTTCGCGATGCACTTAACATAAGAAAGGGAAGCATTGGCGAATGGCATCGCTGTACATGGAACATACCTCACAAGATGGAAATCTATAACAGCTTTGAGTATCATGTAAATCTCAGTCGAAAAGGCTATCGTTCACTGATATACAGTGGAGATCATGACTTGACGGTTCCTTTCTTGTCGACTCAAGCATGGATAAGATCCTTAAACTACTCCATTGTGGAAGATTGGAGACAATGGCATACTAATGGACAAGTTGCAGGATACACAAGGACTTACTCTAATAGGATGACATTTGCAACTGTGAAGGCAAGCCTCTTGTTCCAAAGTTCACATATAGATTTCACAACTATGAAATAA 1413 0.4027 MARSYTRSYRISDFTFHGVFLLPLVLLTLQFSSQLANCGTIVKYLPGFQGALPFLLETGYIGVGENDDVQTFYYFIESENNPKVDPLILWLTGGPGCSAFSGLVFEIGPLMFRNEEYNGSLPNLYLKPHSWTKVSNIIFVDLPVLTGFSYARTDSAAQRSDWLLVNQTHQFLRKWLIEHPKFLSHEVYIGGDSYSGIPIPAVVQEISQGNEEGVQPWVNLQGYLLGNPVTTRKEKNYAIPFAHGMALISDELYHSLQENCKGDYINVDTENVLCSRDIASYNEATKGLNSAHTLDPLCEFITLPKPRKVSWRRALTEKNDPRNFLASPLTLPPLSCRSYPYFLCTYWANDDSVRDALNIRKGSIGEWHRCTWNIPHKMEIYNSFEYHVNLSRKGYRSLIYSGDHDLTVPFLSTQAWIRSLNYSIVEDWRQWHTNGQVAGYTRTYSNRMTFATVKASLLFQSSHIDFTTMK 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241856g00005 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 456 IPR001563 GO:0004185|GO:0006508
Stsc241856g00005 470 Gene3D - 337 463 - -
Stsc241856g00005 470 Gene3D alpha/beta hydrolase 38 304 IPR029058 -
Stsc241856g00005 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Stsc241856g00005 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Stsc241856g00005 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Stsc241856g00005 470 FunFam Serine carboxypeptidase-like 11 36 463 - -
Stsc241856g00005 470 SUPERFAMILY alpha/beta-Hydrolases 42 454 IPR029058 -
Stsc241856g00005 470 Pfam Serine carboxypeptidase 46 455 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241856g00005 Stsc-Chr241856 19881 22794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241856g00005 36 65 Calmodulin-binding Proteins AT2G22960 66.667 4.11e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241856g00005 K16296 - gmx:100792006 706.057