Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241850g00016 ATGGCGAGCCAAAGAATAGGAGGAGACACTGGTTTATCTGAGTCACTGCCCTCAACTCATCACCATGCCCCTACCTATGGAGTTTTTCAGGGAATCAACACCCCACAATCAACCTTAATGAATGAAGTGGGGGTGTTTGATTTTGGAGAGCTGCAAGAGGCAATTGTTCTGCAAGGAATCAATACTAGAAATGATGAAGAAGCCAAAGCATCATCTTTATTCATCACAGGGAGGCCTGCAGCAACACTGGAAATGTTCCCTTCATGGCCAATCAGATTTCACCAAACCTCAAGAGGAGGTTGCAAGTCAGGAGGAGGAGGGGAAGAAAGCACAGACTCAGGTGTGAACACCAACACCCTTTCAAGCAAATTAGAGCCGGAACCCCATCATAATCATTTTGAATCACAAGATTCTCCAATTAGTAGCCACCACCACCAACAAGAAGATCAAGAGGAGCAGCCGATTGCTATTTGTGATGCCTCAAGAAAAGGGCCATCGCCCCAACAAAAGAAAAAGGGAGCAAGTTCCACATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGCTTAGCACAAAACAGGGAAGCTGCAAGGAAAAGCCGTCTAAGGAAAAAGGCTTATGTTCAGCAGCTAGAATCTAGTAGATTAAAGCTTACTCAGCTGGAACAAGACCTTCAAAGAGCACGGTCCCAGGGAATGGTGTTAGGTTGTGGCGGTGCCGGTACGAATATAAGCTCGGGAGGGTTGCAGTTTGACATGGAGTATGGAAGATGGTTAGAAGAAGAAGAGAGGCATATGGGGGAGGTGAGGAGGGGGATAGAGGCGGGGTTATCAGACGGGGAGCTGAGAGTGATAGTGGAGAGTTACATGAGGCATTACCAAGAGCTGTTCAGAGTGAAGGGGGAGGCAGCAAAGTGGGATGTGTTTCACATAATAAATGGAACGTGGACATCTCCGGCAGAGAGGTGCTTCCTCTGGATAGGTGGTTTCAGGCCGTCGGAGGTGATAGGGATGCTCATACAGCACTTGGAGCCACTGGCAGAGCAGCAGATAATGGCAATGTACTCCCTCAGACACTCATCACAGCAGGCTGAAGAGGCACTCTCTCAAGGACTTCACCAGCTTCACCACTCTCTCCTCCACACCATCTCTCCTGCTACTCCTACTCCTGTTCCTGGCCCCCCTCCTCTTGGCCTCCAACACATGCTTTCTGCCATCTCCAAGCTTGCCAATCTTGAAGCTTTCCTCCGCCAGGCTGATAATTTGAGGCAGCAAAGTCTTGAACAATTGTGCCGATTACTAACGATTCGTCAAGCAGCTCGATGTTTTCTTGTGATTGGAGACTACTATGCTCGTCTTCGAGCCCTTAGTTCACTTTGGGCATCAAGGCCACGAGAGAGCACGATGATGATGAACGATGACAATAACTCCTCTTCCCAAACAAGCACGGACTTGCAAATGTTTCAACCTTGTCACCAAAACCATCATTTCTCCAATTTCTGA 1503 0.483 MASQRIGGDTGLSESLPSTHHHAPTYGVFQGINTPQSTLMNEVGVFDFGELQEAIVLQGINTRNDEEAKASSLFITGRPAATLEMFPSWPIRFHQTSRGGCKSGGGGEESTDSGVNTNTLSSKLEPEPHHNHFESQDSPISSHHHQQEDQEEQPIAICDASRKGPSPQQKKKGASSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQDLQRARSQGMVLGCGGAGTNISSGGLQFDMEYGRWLEEEERHMGEVRRGIEAGLSDGELRVIVESYMRHYQELFRVKGEAAKWDVFHIINGTWTSPAERCFLWIGGFRPSEVIGMLIQHLEPLAEQQIMAMYSLRHSSQQAEEALSQGLHQLHHSLLHTISPATPTPVPGPPPLGLQHMLSAISKLANLEAFLRQADNLRQQSLEQLCRLLTIRQAARCFLVIGDYYARLRALSSLWASRPRESTMMMNDDNNSSSQTSTDLQMFQPCHQNHHFSNF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241850g00016 500 PANTHER TRANSCRIPTION FACTOR TGA9 129 466 - -
Stsc241850g00016 500 SUPERFAMILY Leucine zipper domain 185 228 IPR046347 GO:0003700|GO:0006355
Stsc241850g00016 500 Gene3D - 184 235 - -
Stsc241850g00016 500 FunFam BZIP family transcription factor 184 233 - -
Stsc241850g00016 500 Pfam bZIP transcription factor 184 226 IPR004827 GO:0003700|GO:0006355
Stsc241850g00016 500 ProSiteProfiles DOG1 domain profile. 248 463 IPR025422 GO:0006351|GO:0043565
Stsc241850g00016 500 MobiDBLite consensus disorder prediction 125 156 - -
Stsc241850g00016 500 SMART brlzneu 181 246 IPR004827 GO:0003700|GO:0006355
Stsc241850g00016 500 MobiDBLite consensus disorder prediction 109 124 - -
Stsc241850g00016 500 Pfam Seed dormancy control 265 339 IPR025422 GO:0006351|GO:0043565
Stsc241850g00016 500 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 183 227 IPR004827 GO:0003700|GO:0006355
Stsc241850g00016 500 CDD bZIP_HBP1b-like 185 236 - -
Stsc241850g00016 500 MobiDBLite consensus disorder prediction 96 186 - -
Stsc241850g00016 500 Coils Coil 204 231 - -
Stsc241850g00016 500 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 188 203 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241850g00016 Stsc-Chr241850 61560 65816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241850g00016 165 500 bZIP Transcription Factor Family AT1G08320 62.611 4.01e-148 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc241850g00016 DOG1 1.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241850g00016 K14431 - gmx:778195 572.007