Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241848g00008 ATGGCTGTTGAGGAATCTGAGCCTGTGATTCCTGAACTAGAAAGAGAAGAGAATTTGATTGCTGCAGCAAAACATATTGTGAAGGCATTAGGATCAAACAAGAACCTCACCAATGATGCCAAGAAGGTTCTGGCTGATCTTGGCACCAAGTTGTCATCCATGAGCATTCCTAGTGAGATGGAGGAGGGGAAGGAAGGGGAGGAGGAAGAGGAAGAGGAGGAGGAAGGTGCTGTGAATGCTACCGAAGATCGGTTTAATGTGATTCGGGAGAAGATCATGAGATGGGAGGAAGATCAGTCTATGATTTGGGATTTGGGGCCTGAAGAAGCATCTGAGTATTTGAATGCAGCTAATGAGGCTCGCCGTTTGATTGAGAAGTTGGAGAGTTTCAATTTGAGTAAAGATGATCAAGAGTATAAGCTTCTGCAGAGGGCTTATAGTGTTCTTCAAACAGCTATGGCACGGCTCGAGGAAGAGTTCAGGAACTTACTTATCCAGAACAGGCAACCTTTTGAACCCGAATATGTGTCTTTTCGATCAAGCGAAGAAGATCCTGTTGATGAGAACTCTATTGTCTCTCTGGGTGATGAATCGGTTGAGGAATCGCTTCAAAGAGATAGTGTCAGCAGAGCTGCAGAGGAGCATATAATTGATTTAGTCCATCCAGGTGTGATCCCGGATCTCAGGTGCATTGCAAATCTATTGTTTGCTTCTAATTATGTCCAAGAATGTTCTCATGCTTATACCATTGTCAGAAGGGATGCTTTAGATGAGTGCCTCTTCATTCTTGAAATGGAAAGTGAGAGGTGGCTAAGCGACCAGATTTTCGGGGAGGGTGAACCTGTTAGCATTGCTTGTTTCGTTGATGCATCCAAGGCTTCAATACTGCAGCTTCTGAACTTCGGTGAAGCCATGTCTATTGGTCCTCACAAACCTGAGAAGCTGTTTCGCATTCTCGACATGTATGAGGTTCTGGCGGACCTTATGCCAGACCTGGACTCTTTGTACTTAGATGATGTTGGTTCTTCTGTTAGAATCGAATGCCATGAGGTTTTGAAGAGGCTTGGCGATTGTGTGAGGGTGACATTTATCGAATTTGAGAATGCCATCGCAGCAAATGCTTCTACAACTCCTTTTATAGGTGGTGGAATACATCCTTTGACAAGATATGTCATGAATTATCTCAGGACTCTCACTGATTACAGCGAGTCGCTTAATCTGCTTCTGAAGGACAGGGAAGAAGAGGATGCCATTTCCCTTTCACCAGATATGAGTCCAGGTACTGAAGAAGATAGCAAAAGCCCGGGATCTCCCAGTGGAGTCTCCTCAATGACCCTCCACTTTCGATCGGTTGCATCAGTCTTGGAATGTAACCTTGAGGAGAAGTCCTTGTTATATAAAGAAGTTCCATTGCAGCATTTGTTCTTAATGAACAACCGACATTACATGGCAGAAAAAGTTAAGGGATCTGAACTTCGGCTCATATATGGAGACGAATGGATTCGGAAGCGCAACTGGAAGTTTCAGCAGCATGCAATGAAATATGAGAGAGCTAGTTGGAGTTCCATTCTCAACCTGCTCAAGGATGAGGGCATTCATGTTCCTGGGACAACTTCCATCTCTAAAACCCTTCTTAGGGAGAGACTGAGGAGCTTCTACCTCGGCTTTGAGGATGTTTACCGGATCCAAACAGCTTGGCTTATCCCGGACGTCCAGCTTCGGGAGGATTTGCGGATTTCGATATCACTCAAGGTAATCCAAGCTTATAGGACATTTGTTGGAAGGCATAATAGTCACTTAAGTGACAAACACATCAAATACACTGCTGATGATTTAGAAAATTACCTACTTGATTTCTTTGAGGGATCTCAAAAATATTTACAAAACCCACATAGGAGGTGA 1902 0.4401 MAVEESEPVIPELEREENLIAAAKHIVKALGSNKNLTNDAKKVLADLGTKLSSMSIPSEMEEGKEGEEEEEEEEEGAVNATEDRFNVIREKIMRWEEDQSMIWDLGPEEASEYLNAANEARRLIEKLESFNLSKDDQEYKLLQRAYSVLQTAMARLEEEFRNLLIQNRQPFEPEYVSFRSSEEDPVDENSIVSLGDESVEESLQRDSVSRAAEEHIIDLVHPGVIPDLRCIANLLFASNYVQECSHAYTIVRRDALDECLFILEMESERWLSDQIFGEGEPVSIACFVDASKASILQLLNFGEAMSIGPHKPEKLFRILDMYEVLADLMPDLDSLYLDDVGSSVRIECHEVLKRLGDCVRVTFIEFENAIAANASTTPFIGGGIHPLTRYVMNYLRTLTDYSESLNLLLKDREEEDAISLSPDMSPGTEEDSKSPGSPSGVSSMTLHFRSVASVLECNLEEKSLLYKEVPLQHLFLMNNRHYMAEKVKGSELRLIYGDEWIRKRNWKFQQHAMKYERASWSSILNLLKDEGIHVPGTTSISKTLLRERLRSFYLGFEDVYRIQTAWLIPDVQLREDLRISISLKVIQAYRTFVGRHNSHLSDKHIKYTADDLENYLLDFFEGSQKYLQNPHRR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241848g00008 633 MobiDBLite consensus disorder prediction 418 441 - -
Stsc241848g00008 633 MobiDBLite consensus disorder prediction 425 441 - -
Stsc241848g00008 633 Pfam Exo70 exocyst complex subunit 265 617 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc241848g00008 633 PANTHER EXOCYST COMPLEX PROTEIN EXO70 266 622 IPR004140 GO:0000145|GO:0006887
Stsc241848g00008 633 MobiDBLite consensus disorder prediction 62 78 - -
Stsc241848g00008 633 MobiDBLite consensus disorder prediction 51 80 - -
Stsc241848g00008 633 Gene3D Exocyst complex component Exo70 92 629 - -
Stsc241848g00008 633 Coils Coil 139 166 - -
Stsc241848g00008 633 Coils Coil 64 84 - -
Stsc241848g00008 633 SUPERFAMILY Cullin repeat-like 98 621 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241848g00008 Stsc-Chr241848 40834 42810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241848g00008 12 633 EXO70 exocyst subunit family AT3G29400 47.313 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241848g00008 K07195 - gmx:100799102 1052.74