Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241842g00009 ATGCTCAATTCAATCATCAGGACCGTTTCTTCAACCACACCGCCATGGCCATGGCTTTCTTCCAGACTCTTCTCAACCTCATCTCTTCCATCTTCAACTTCCACCGATAAATCTTTCATGCTTTCCTACCTAATCGGCACCTGCGGCTTCCCACCGAAAACCGCCGCTTCGGTTTCCAACCGCCTCACCTTCGAAACGAGCGAGAAACCAGACGCTGTGGTCGCATTCTTCAAGAGCCACGGTTTATCGGAAGCGGCGGCGTTTAAGGTCCTCCGATTCACGCCAAGGTTACTCGTTACAAATCCCGAGAGAACTTTGCAGCCGAAAATCGATTTCTTCAAGTCCAAAGGGTTTTCAACCTCCGACATATCCAAAATCATTGTAGGTTGGCCTCCGATCCTCACTCGAAGTTTGCAGAACGAGATCATTCCGTGCTTTGATTTCTTGGAGAGTATGATTCTGTCGAAGGAGATGCTTTTGAGAACTGTGATTCGCTATGCCGGTGTTCTCTGTGATCTTGAAAGCTGTATTATACCTAATGTGAAACTGCTGAGAGATGCAGGAGTTCCTGAATCTCTTATTGTTAAGTTTATACAATACTTTCCGCTGTCGCTGAAGGCTCCTTTGAAGAAATTCAAGGAGGCGGTGCAGGAGGCGAAGGAGATGCAGCTTGATCCTTTGAGACTGCAGTTTGTTATAGTTGTTCATGTCATGTTAAATGTCTCGAAAACCACCTGGGCAAGGAGGGAAGGTATATTTAGAAGATGGGGTTGGACTGATGATGATATCTCTGCGGCGTTTAGAGTCCACCCGTTCTGCATATCGGTTTCGGACAACAAAATCGAGGCGATCATGGATTTTCTGGTGAATACATTGGCTACAAGTCTTCTGATATTGCCAGGTATCCGTGGGTATTGTCCATGA 924 0.4654 MLNSIIRTVSSTTPPWPWLSSRLFSTSSLPSSTSTDKSFMLSYLIGTCGFPPKTAASVSNRLTFETSEKPDAVVAFFKSHGLSEAAAFKVLRFTPRLLVTNPERTLQPKIDFFKSKGFSTSDISKIIVGWPPILTRSLQNEIIPCFDFLESMILSKEMLLRTVIRYAGVLCDLESCIIPNVKLLRDAGVPESLIVKFIQYFPLSLKAPLKKFKEAVQEAKEMQLDPLRLQFVIVVHVMLNVSKTTWARREGIFRRWGWTDDDISAAFRVHPFCISVSDNKIEAIMDFLVNTLATSLLILPGIRGYCP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241842g00009 307 SMART mt_12 124 155 IPR003690 GO:0003690|GO:0006355
Stsc241842g00009 307 SMART mt_12 160 190 IPR003690 GO:0003690|GO:0006355
Stsc241842g00009 307 SMART mt_12 88 119 IPR003690 GO:0003690|GO:0006355
Stsc241842g00009 307 SMART mt_12 264 294 IPR003690 GO:0003690|GO:0006355
Stsc241842g00009 307 SMART mt_12 195 225 IPR003690 GO:0003690|GO:0006355
Stsc241842g00009 307 Pfam mTERF 75 291 IPR003690 GO:0003690|GO:0006355
Stsc241842g00009 307 Gene3D Transcription termination factor 3, mitochondrial 142 299 IPR038538 -
Stsc241842g00009 307 PANTHER CGI-12 PROTEIN-RELATED 39 293 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241842g00009 Stsc-Chr241842 57603 59247 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Stsc241842g00009 mTERF 1.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241842g00009 K15031 - qsa:O6P43_003532 254.603