Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241837g00001 ATGGGTAACAAAGTTAAACTTGGAAAAAGGGGAATAGTTTCTAAGAGCCCTGAAAAATTCAAGCTGGAACGCATGGGGTACCTCAATTCGGTTTTGTCATCTTCAAGTCAGGTTCATGCAGCAGAAGATTCACCTGTGAGTGGTGGAGGACTCAGCCAGAATGGAAAATTTAGCTATGGGTATGCTAGCTCTCCAGGCAAGAGATCTTCGATGGAAGATTTTTATGAGACGAGAATTGATGGTGTGGATGGTGAAATAGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGCGGTGCTCGTGCTGCTGAGTACGTCAAACAACACCTATTTAGTAATTTGATCAAACATCCAAAATTCATTTCTGACACCAAATCTGCAATAGTTGGTGACCGTTTGCTCGTTGCTAATGTCGGGGACTCTAGGGCTGTTATATGCAGGGGTGGAAATGCCATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAAATGCTGGGGGCTTTGTTATGTGGGCTGGAACCTGGAGAGTTGGTGGCGTTCTTGCCGTTTCTCGTGCTTTTGGTGATAGACTCCTGAAACAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAGTTGATAGCTCTCTTGAGTTTCTTATCTTAGCCAGCGACGGGCTATGGGATGTTGTCTCCAACGAGGAAGCTGTTGCGATGATAAAGAAAATAGATGATGCAGAGGAGGCAGCAAAGAAGTTGATGCAAGAAGCATATCAAAGAGGTAGCTCCGACAACATTACTTGTGTTGTCGTTCGTTTCTTGACGAACCAAGGCGCTTCTTCTCATACTAACTCCGGCTAA 861 0.446 MGNKVKLGKRGIVSKSPEKFKLERMGYLNSVLSSSSQVHAAEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQHLFSNLIKHPKFISDTKSAIVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKKIDDAEEAAKKLMQEAYQRGSSDNITCVVVRFLTNQGASSHTNSG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241837g00001 286 ProSiteProfiles PPM-type phosphatase domain profile. 58 273 IPR001932 -
Stsc241837g00001 286 ProSitePatterns PPM-type phosphatase domain signature. 89 97 IPR000222 GO:0043169
Stsc241837g00001 286 Gene3D - 50 285 IPR036457 -
Stsc241837g00001 286 Coils Coil 236 256 - -
Stsc241837g00001 286 CDD PP2Cc 57 273 IPR001932 -
Stsc241837g00001 286 SUPERFAMILY PP2C-like 52 273 IPR036457 -
Stsc241837g00001 286 PANTHER PROTEIN PHOSPHATASE 42 272 IPR015655 GO:0004722|GO:0006470
Stsc241837g00001 286 Pfam Protein phosphatase 2C 125 266 IPR001932 -
Stsc241837g00001 286 SMART PP2C_4 48 271 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241837g00001 Stsc-Chr241837 7979 11679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241837g00001 25 284 PP2C-type Phosphatase Gene Family AT4G31750 79.932 6.62e-167 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241837g00001 K17506 - gmx:100795017 483.796