Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241837g00001 | ATGGGTAACAAAGTTAAACTTGGAAAAAGGGGAATAGTTTCTAAGAGCCCTGAAAAATTCAAGCTGGAACGCATGGGGTACCTCAATTCGGTTTTGTCATCTTCAAGTCAGGTTCATGCAGCAGAAGATTCACCTGTGAGTGGTGGAGGACTCAGCCAGAATGGAAAATTTAGCTATGGGTATGCTAGCTCTCCAGGCAAGAGATCTTCGATGGAAGATTTTTATGAGACGAGAATTGATGGTGTGGATGGTGAAATAGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGCGGTGCTCGTGCTGCTGAGTACGTCAAACAACACCTATTTAGTAATTTGATCAAACATCCAAAATTCATTTCTGACACCAAATCTGCAATAGTTGGTGACCGTTTGCTCGTTGCTAATGTCGGGGACTCTAGGGCTGTTATATGCAGGGGTGGAAATGCCATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAAATGCTGGGGGCTTTGTTATGTGGGCTGGAACCTGGAGAGTTGGTGGCGTTCTTGCCGTTTCTCGTGCTTTTGGTGATAGACTCCTGAAACAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAGTTGATAGCTCTCTTGAGTTTCTTATCTTAGCCAGCGACGGGCTATGGGATGTTGTCTCCAACGAGGAAGCTGTTGCGATGATAAAGAAAATAGATGATGCAGAGGAGGCAGCAAAGAAGTTGATGCAAGAAGCATATCAAAGAGGTAGCTCCGACAACATTACTTGTGTTGTCGTTCGTTTCTTGACGAACCAAGGCGCTTCTTCTCATACTAACTCCGGCTAA | 861 | 0.446 | MGNKVKLGKRGIVSKSPEKFKLERMGYLNSVLSSSSQVHAAEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQHLFSNLIKHPKFISDTKSAIVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKKIDDAEEAAKKLMQEAYQRGSSDNITCVVVRFLTNQGASSHTNSG | 286 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241837g00001 | 286 | ProSiteProfiles | PPM-type phosphatase domain profile. | 58 | 273 | IPR001932 | - | |
Stsc241837g00001 | 286 | ProSitePatterns | PPM-type phosphatase domain signature. | 89 | 97 | IPR000222 | GO:0043169 | |
Stsc241837g00001 | 286 | Gene3D | - | 50 | 285 | IPR036457 | - | |
Stsc241837g00001 | 286 | Coils | Coil | 236 | 256 | - | - | |
Stsc241837g00001 | 286 | CDD | PP2Cc | 57 | 273 | IPR001932 | - | |
Stsc241837g00001 | 286 | SUPERFAMILY | PP2C-like | 52 | 273 | IPR036457 | - | |
Stsc241837g00001 | 286 | PANTHER | PROTEIN PHOSPHATASE | 42 | 272 | IPR015655 | GO:0004722|GO:0006470 | |
Stsc241837g00001 | 286 | Pfam | Protein phosphatase 2C | 125 | 266 | IPR001932 | - | |
Stsc241837g00001 | 286 | SMART | PP2C_4 | 48 | 271 | IPR001932 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241837g00001 | Stsc-Chr241837 | 7979 | 11679 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241837g00001 | 25 | 284 | PP2C-type Phosphatase Gene Family | AT4G31750 | 79.932 | 6.62e-167 | 463 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241837g00001 | K17506 | - | gmx:100795017 | 483.796 |