Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241835g00013 ATGGTGGACGTGAAGAAGCTAGTTTATCTCCATGGTGCTTTGTGTGAAGTTTTAAGGCTTTTTCCGCCGATACCACTCGAGCGCAAGCAGCCGATTAAAGACGACATACTTCCGAGTGGACATCTTGTGGATTCGAGTACGAAAATCATATTTTCTTTCTATGCAATGGGGAGATCTGAAGAGATATGGGAAAAAGATTGTCTAGAATTCAAACCAGAGAGATGGATATCTGAAAAAGGAGAAATTGTTCATATTCCTTCTTACAAGTTCATTAGTTTTAATGCAGGACCAAGGACTTGTTTGGGTAAGGACATGTCATTTGTCCAAATGAAGATGGTAGCATCTGCTATTTTAAGGTACTATTGTGTACAAATGGTGGAAGATCATCCTCAAGTTATCCCAAGCCTTTCAATTACGCTTCTTATGAAGTATGGTTTGAAGAAATATTTTTCTGATGCTCTGCCAAGGCATGTGCATATATGCGAAATCTTTGGTGGGCCGGCTGACGGACAATGTGGTCTTATGGGAATGCTAAGTTTAAATGATCCATGGATGGCAGCCGAGGCAATAGCCTGA 576 0.408 MVDVKKLVYLHGALCEVLRLFPPIPLERKQPIKDDILPSGHLVDSSTKIIFSFYAMGRSEEIWEKDCLEFKPERWISEKGEIVHIPSYKFISFNAGPRTCLGKDMSFVQMKMVASAILRYYCVQMVEDHPQVIPSLSITLLMKYGLKKYFSDALPRHVHICEIFGGPADGQCGLMGMLSLNDPWMAAEAIA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241835g00013 191 PRINTS E-class P450 group IV signature 100 118 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00013 191 PRINTS E-class P450 group IV signature 7 23 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00013 191 PRINTS E-class P450 group IV signature 58 76 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00013 191 PRINTS E-class P450 group IV signature 84 100 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00013 191 SUPERFAMILY Cytochrome P450 3 148 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00013 191 PANTHER CYTOCHROME P450 3 146 - -
Stsc241835g00013 191 Pfam Cytochrome P450 3 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00013 191 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 93 102 IPR017972 GO:0005506|GO:0016705
Stsc241835g00013 191 Gene3D Cytochrome P450 1 153 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241835g00013 Stsc-Chr241835 75076 76770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241835g00013 3 147 Cytochrome P450 AT2G23180 57.241 4.00e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241835g00013 - - ahf:112803756 271.937