Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241835g00012 ATGTTACTTTTCTATGCCTCAACAATTGCATCAATAATCATAACAATCCTCATAGTCTTTTATGTTCTTGATCGCAAAAGATGTTGTAGAACCCCTCTTTTCATAGATTGGCCACTCTTTGGCATGTCACCACAACTTCTTTGCAACTTGTCCCAATTTCATGAGTTCTTAGCAAATGTCTTGAATAGCAAAGGAGGCACTGCTCAATTCATGGGACCTTGGTTCTCCAACATGAACTTCTTGCTCACCACTGATCCCATGAATGCTCATCACGTTTTCAGCAAGAATTATGAAAACTATGTCAAGGGGCCCGAGTTTCGCGAGGTTTTCGATGTCTTCGGAGACGCGATTATCGTAACGGACGATTCTAAGAAGTGGAAATACTTGAAATCTTTTTTCCTTTCTATCATCAAACACAAAGATTTCGATATCTTCTTCGAGAAAACGATTCAGAGCAAGGTGCATGACGCCTTGCTTCCGATGCTAGATCATGCATGGTTGCATGGATCAGTGTTGGATCTTCAAGATGTCTTTTGTAGATTCACATTTGATAACATAACCTCCTTGGTGTTTGGGTTTGATCCTAAATCCCTTTCACTTGGATTTCCAATTGTTGAAGCTGAAAAGGCTTTTGATGAGATCGAAAAGTGCTTATTCTACAGACAAATGGTGCCGAAAGCTCTTTGGAAGTTTCAAGAATGGCTTCAAGTTGGTAAAGAGAAGAAGATGGCGAAAGCACGCAAGGTTTTCGACGATTTCCTTTGCGCTCAAATAGCTTCTAAGCTTGAAGAACAAAGCAGATCCAAGAAGACTAAAGATGAAGCTCTTCGATTCGAAAGCTTTCTTGCTGAAGCTACAAGATACAAATCGCGTGATGCAAAGTTTTTAAGAGACGCAGGATTTAATCTTTTTGCAGCCGGAAGAGATACCATTGCTTCACTTCTAACATGGTTCTTTTGGCTTGTTGCTACACATCCATTAGTAGAAGCTAAGATTCTCGAAGAAATAAAAGAAATTTTTGGCGCCAATGACGGAGAAAATTACAGAATTTTAGGGATAGAAGATGTGAAGAAGCTAGTTTATCTCCACGGTGCTTTGTGTGAAGTTTTAAGGCTTTTTCCTCCTATACCTTTCGAGCGCAAGAAACCAATCAAAGATGACATACTTCCGAGTAGACATATTGTGAATTCGAATTCGAATATTGTGTTTTCTATCTACGGAATGGGAAGATCTGAAGAAATTTGGGGAAATGATTGCTTGGAATTTAAGCCAGAGAGATGGATATCTGAAAAAGGAGGAATTGTTCATGTTCCTTCTTACAAGTTCATAAGTTTTAATGCAGGACCAAGGATTTGTTTGGGTAAGGATATGACTTTCATTCAAACGAAGATTGTCATATCTGCTATTCTACAAAAGTATAGCATTCGAGTTGTGGAAGATTCTTCTGAAGTTACACCTAGCCTTTCAATAATTCTTCTTATGAAGCATGGTTTGAAGAAGCCTTCCAGCATTGACGCCGCAAGTTGTGCCTCTACGGCTGGTGTAAATCCAAATTTTAAGGCAAAGCTTGCTGACGAAGATGTATTTCCCGGCAAGACAATCGAGATTGAACTTCCCGAGGTAAACGTGGCGGCGATTGGCTGA 1644 0.3972 MLLFYASTIASIIITILIVFYVLDRKRCCRTPLFIDWPLFGMSPQLLCNLSQFHEFLANVLNSKGGTAQFMGPWFSNMNFLLTTDPMNAHHVFSKNYENYVKGPEFREVFDVFGDAIIVTDDSKKWKYLKSFFLSIIKHKDFDIFFEKTIQSKVHDALLPMLDHAWLHGSVLDLQDVFCRFTFDNITSLVFGFDPKSLSLGFPIVEAEKAFDEIEKCLFYRQMVPKALWKFQEWLQVGKEKKMAKARKVFDDFLCAQIASKLEEQSRSKKTKDEALRFESFLAEATRYKSRDAKFLRDAGFNLFAAGRDTIASLLTWFFWLVATHPLVEAKILEEIKEIFGANDGENYRILGIEDVKKLVYLHGALCEVLRLFPPIPFERKKPIKDDILPSRHIVNSNSNIVFSIYGMGRSEEIWGNDCLEFKPERWISEKGGIVHVPSYKFISFNAGPRICLGKDMTFIQTKIVISAILQKYSIRVVEDSSEVTPSLSIILLMKHGLKKPSSIDAASCASTAGVNPNFKAKLADEDVFPGKTIEIELPEVNVAAIG 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241835g00012 547 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Stsc241835g00012 547 Pfam Cytochrome P450 37 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00012 547 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00012 547 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00012 547 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00012 547 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00012 547 PANTHER CYTOCHROME P450 23 498 - -
Stsc241835g00012 547 CDD CYP86A 70 498 - -
Stsc241835g00012 547 Gene3D Cytochrome P450 24 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00012 547 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00012 547 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00012 547 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00012 547 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00012 547 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00012 547 SUPERFAMILY Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241835g00012 Stsc-Chr241835 66445 68734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241835g00012 9 499 Cytochrome P450 AT4G32170 44.668 1.62e-146 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241835g00012 - - adu:107489915 659.448