Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241835g00011 ATGGGACCATGGTTCACCAAAATGAACTACATGGTCACTAGTGACCCCATGAATGTTCATCACATCATGAGCAAAAATTTTGACAACTATGTTAAGGGCCCCGAGTTTCGCGAGATCTTCCATGCTTTCGGAGACGGTATTGTGGCCGCAGATTTCGAGACATGGAAATATATTAGGACGCTTCAACATTTCTTGTTCCGGCGAAAGAGTTTCGAGAAAATGACCGAGGAAACCATCCGGAAGAAGGTTCAGAATGGCTTGATTCCGATATTTGATCATGCATGCTTTTATGGAAAGGTTTTGGATATTCAAGATGTGTTTAGTCGATTAATGTTCGACGAGACATCCATCATGGTTTTAGGACGTGATCCTAAGAGTCTCTCAATTGAATTTCCATTGGTGGAAGCTGAGAAGGCCTTTGATGAAATTGAGGAGTCCATCTTCTTCAGGCATAGTGTGCCAACAAGTGTTTGGAAGTTTCAAGAATGGCTTCAAATTGGTCATCAGGAGAAGAAGATGGCAAAAGCATGCAAAAATTTTGACCAATTTCTATATTCATGCATAGCAACTAGGCACCAAGAGTTAAGTACATGCATCAAGAGTTGTAATAATCATGAAAACTGTGATAATCCAGCTCATCAATTTGATGACTTGATTAGTGCTATGATGATGATGAATGAGAAGAATGGCAAAGTGGTTCATGACGACAAGTTTCTGAGAGATTCTGCGTTCAATCTTTTTGTAGCCGGAAGAGACACCATAACTTCGGGTCTTACATGGTTCTTCTGGCTTGTTGTAACACACCCATCCGTAGAAGCCAAGATTCTTGAAGAAATCGAAGAAAATTTTGGCGGCAGTACCAGAGAGAAATATGAAATTTTAGGGTCGGAAGATTTGAAGAAGCTAGTCTATTTACATGGTGCTCTATGTGAAAGTTTGAGGCTATTTCCACCTGTTCCTATTGAACGAAAGAAGCCATTGAAATGTGATACACTTCCAAGTGGTCATCATGTTAATCCAAATACTATTGTTTTGTTGTTTAGTTATGCAATGGCAAGGCTTAAAGAGATATGGGGAGAAGATTGCTTGGAGTTCAAGCCAGAAAGATGGATTTCAGAAAAAGGAGATATAATACGCGTTCCTTCGTATAAGTTTGTTAGTTTTAATTCAGGTCCGAGATCATGCTTAGGAAAAGACTTGTCTTTTGTTCAAATGAAAATGGTGGCATCTACTATTTTGCGCAACTATTGCATTCAAGTGGTGGAAAATCATCCTACTACCAAAGCTCATTCCATTGTGCTTCTTATGAAGCATGGCTTGAAGGTTATGATAACAAAAAGAAACGTTTGA 1350 0.3926 MGPWFTKMNYMVTSDPMNVHHIMSKNFDNYVKGPEFREIFHAFGDGIVAADFETWKYIRTLQHFLFRRKSFEKMTEETIRKKVQNGLIPIFDHACFYGKVLDIQDVFSRLMFDETSIMVLGRDPKSLSIEFPLVEAEKAFDEIEESIFFRHSVPTSVWKFQEWLQIGHQEKKMAKACKNFDQFLYSCIATRHQELSTCIKSCNNHENCDNPAHQFDDLISAMMMMNEKNGKVVHDDKFLRDSAFNLFVAGRDTITSGLTWFFWLVVTHPSVEAKILEEIEENFGGSTREKYEILGSEDLKKLVYLHGALCESLRLFPPVPIERKKPLKCDTLPSGHHVNPNTIVLLFSYAMARLKEIWGEDCLEFKPERWISEKGDIIRVPSYKFVSFNSGPRSCLGKDLSFVQMKMVASTILRNYCIQVVENHPTTKAHSIVLLMKHGLKVMITKRNV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241835g00011 449 Gene3D Cytochrome P450 1 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00011 449 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 388 397 IPR017972 GO:0005506|GO:0016705
Stsc241835g00011 449 PRINTS E-class P450 group I signature 395 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00011 449 PRINTS E-class P450 group I signature 258 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00011 449 PRINTS E-class P450 group I signature 238 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00011 449 PRINTS E-class P450 group I signature 385 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00011 449 PRINTS P450 superfamily signature 307 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00011 449 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00011 449 PRINTS P450 superfamily signature 249 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00011 449 PRINTS P450 superfamily signature 386 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00011 449 Pfam Cytochrome P450 4 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00011 449 CDD CYP86A 1 440 - -
Stsc241835g00011 449 SUPERFAMILY Cytochrome P450 4 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00011 449 PANTHER CYTOCHROME P450 10 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241835g00011 Stsc-Chr241835 62116 63465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241835g00011 2 447 Cytochrome P450 AT1G47620 47.007 1.60e-143 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241835g00011 - - gmx:100780625 575.474