Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241835g00010 ATGGCCATGTTGTTTCTCATTCTAGCAATCCCTTTATTCCTATATGTTGTTCATCGTAGAAGATGTTGTAAAACCCCTCTCTTGATAGATTGGCCAATCCTTGGCATGTTACCTCAACTCCTTAGCAACTTGTGGCAAATCCATGATTATGCAACAAATGTTTTGAGACAAAATGGTGGCACCGGTGAATTCATGGGACCATGGTTCTCCAAAATGAACTATATGGTCACTAGTGACCCCATGAATGTTCATCACATAATGAGCAAAAGCTTTGACAACTATGTTAAGGGCCCCGAGTTTCGCGAGATCTTCCATGCTTTCGGAGACGGTATTGTGGCTTCAGATTCTGGGACATGGAAATACATTAGGACCATGCAACATTCCTTGTTCCGGCAGAAGAGTTTTGAGAAAATGGCCGAGCAAACCATCCGGAGGAAGGTTCAGAATAGCTTGCTTCCGATATTTGATCATGCATGCTTTCATGGAAAGGTTTTGGATCTTCAAGATGTGTTTAGTCGATTAACGTTCGATGAGACAAGCATCATGGTTTTAGGACATGATCCTAAGAGTCTCTCAATTGAATTTCCATTGGTCGAAGTTGAGAAGGCCTTTGATGAAATTGAGGGATCCATATTCTACAGGCACAGCGTGCCAAGAAGTGTTTGGAAGTTTCAAGAATGGCTTCAAATTGGTGCGGAGAAGAAGATGACAAGAGCATGCAAAAATTTTGATCAATTTCTATATTCATGCATAGCAACTAAGCACCAAGAGCTAAGTAAATGCAACAAAAGTCATGAAAAGTGTGATAATCAAGCTCATCAATTTGATGACTTGATTAGTGCTATGATTATGATGAATGAAGAGAAGGGCAAAGTGGTCCATGATGATAAGTTTTTAAGAGATGTTGCATTCAATCTTTTTGTAGCTGGAAGAGACACCATAACTTCAGCTCTTACTTGGTTCTTTTGGCTTGTTGCAACACACCCGTTAGTAGAAGCCAAGATTCTTGAAGAAATCGAAGAAAATTTTGGTGCCAGTGCCAAGGAGAAATGCGAAATTTTAGGGATGGAAGAGGTGAAGAAGCTAGTCTATTTACATGGTGCTTTATGTGAAGGTTTAAGGCTATTTCCACCTGTTCCTATTGAACGCAAGAAACCTTTGAAACGTGATACACTTCCAAGTGGTCATCATGTTAATCCAAATACCACTATTTTGTTGTTTACTTATGCAATGGGAAGATTTGAAGAGATATGGGGTAAAGATTGCTTAGAGTTTAAGCCAGAGAGATGGATTTCAGAAAAAGGAGAAATAATACACGTTCCATCTTATAAGTTTATTAGTTTTAATGCAGGTCCTAGAACATGCTTAGGAAAAGACTTGTCTTTTCTTCAAATGAAAATGGTGGCATCTACTATTTTGCGCAATTATCGCGTACAAGTAGTGAAAAATCATCCTACTACCCCAGCCCATTCCATTGTGCTTCTTATGAAGCATGGCTTGAAAGTTATGATAGCAAAAAGAAGAGTTTAA 1530 0.3902 MAMLFLILAIPLFLYVVHRRRCCKTPLLIDWPILGMLPQLLSNLWQIHDYATNVLRQNGGTGEFMGPWFSKMNYMVTSDPMNVHHIMSKSFDNYVKGPEFREIFHAFGDGIVASDSGTWKYIRTMQHSLFRQKSFEKMAEQTIRRKVQNSLLPIFDHACFHGKVLDLQDVFSRLTFDETSIMVLGHDPKSLSIEFPLVEVEKAFDEIEGSIFYRHSVPRSVWKFQEWLQIGAEKKMTRACKNFDQFLYSCIATKHQELSKCNKSHEKCDNQAHQFDDLISAMIMMNEEKGKVVHDDKFLRDVAFNLFVAGRDTITSALTWFFWLVATHPLVEAKILEEIEENFGASAKEKCEILGMEEVKKLVYLHGALCEGLRLFPPVPIERKKPLKRDTLPSGHHVNPNTTILLFTYAMGRFEEIWGKDCLEFKPERWISEKGEIIHVPSYKFISFNAGPRTCLGKDLSFLQMKMVASTILRNYRVQVVKNHPTTPAHSIVLLMKHGLKVMIAKRRV 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241835g00010 509 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00010 509 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00010 509 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00010 509 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00010 509 Gene3D Cytochrome P450 16 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00010 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Stsc241835g00010 509 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00010 509 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00010 509 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00010 509 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00010 509 Pfam Cytochrome P450 30 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00010 509 PANTHER CYTOCHROME P450 22 502 - -
Stsc241835g00010 509 SUPERFAMILY Cytochrome P450 15 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241835g00010 509 CDD CYP86A 63 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241835g00010 Stsc-Chr241835 54659 56188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241835g00010 5 507 Cytochrome P450 AT1G47620 44.752 4.00e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241835g00010 - - gmx:100780625 700.664