Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241833g00009 ATGGCGGCTGTTCCTCGTGTTGACTGGAATAAGGAAAAGAAAACTCTGCACCAGAATGATGACTGGTTCGAACGCTTATATTCGCTACACGGAAGGGATGCAGATGGCGGTTACCAATCGATGACTGGCTGCATTTCCATGGAAGATGTGAAGAGAGTGTTGAAATCGAAGAATGATGTGACAATGGTGTTGAACGAGGCGAAGAAGATCCTCCCCAGGGCCACTGAAATGTTCGCGCAAGAGTTGGCTCTTCGTGCCTTCCTCCACGCCAAACAGGAGGATAGAAAGCAAATCATGCTCAAAGGTTTCACTGCCGCACTTGTTGACAACTATGATATCTACCAATTCTTGGTTGATCTTTATGCCAAGGCTAACAAGTATAAGGATGTGGTTGATGCGGCACAAGCTGCTCATGAATCAGCAGAACTAGACATGGTTACTGATAAACAATGA 453 0.4592 MAAVPRVDWNKEKKTLHQNDDWFERLYSLHGRDADGGYQSMTGCISMEDVKRVLKSKNDVTMVLNEAKKILPRATEMFAQELALRAFLHAKQEDRKQIMLKGFTAALVDNYDIYQFLVDLYAKANKYKDVVDAAQAAHESAELDMVTDKQ 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241833g00009 150 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 45 139 - -
Stsc241833g00009 150 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 47 100 IPR003958 -
Stsc241833g00009 150 SUPERFAMILY Histone-fold 54 121 IPR009072 GO:0046982
Stsc241833g00009 150 Gene3D Histone, subunit A 9 123 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241833g00009 Stsc-Chr241833 47429 48272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241833g00009 44 123 CCAAT-HAP5 Transcription Factor Family AT1G56170 33.750 2.30e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241833g00009 - K14283 tho:SP60_02695 32.3426