Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241831g00017 ATGGTTTTGAGTACGAAGGTTCAGGTGAATTTAGCAGCAGAAGAAGGAGGTTATTTCAATGGGAATAATGTTGGTGATAGTAACAATGATGTGAATAGCTACATTAGTTGGGAGGATTTGGAAGTGGGAGAGGAAAGTTTGGAATTGAAATCAAAGAAAGAGTTAAGAGTTATTGTGGTTGATCAACATGGTAATAAGGGACATTCAAAAACTGTTCAAGGTGCTGTCAATATGGTTCCAGATCACAACAAAGAAAGGGTCAAAATTTACATTTTCCCAGGAACTTATAGGGAAAAAGTGCTTGTTCCAAAAAGCAAGCCTTATATTTCATTTATAGGTAAAAGAAATGGAACAGCAAGTGCTGTGATTACTTGGAACAGCAAATCATCTGATAAAGGCCCTAATGGCCAAGCATTGGGAACTTATGGTTCAGCAACTGTTGGAATTGATTCTGATTATTTCTGTGCATCTCAGGTCACTTTTGAGAACTCAGTGGTTGCAATGCCTGGTGGAAATGGAATGCAAGCAGTGGCATTGAGGGTGAACAGTAACAGAGCCATGTTCTATAAAGTTAAGGTCAAAGGAACACAGGACACTCTCTTAGACAACACAGGAACACATTACTTCTATAAATGTTACATCCAAGGAAAGATTGATTTCATCTTTGGCAGTGCTAAATCACTCTATGAGAAATGTAGGCTTGAGTCAATAGCTGAGAGTTATGGAGCAATTGCAGCACATCACAGGGATTCAGCAAAACAAGACACAGGATTTTCATTTGTTGGATGCAAGATTAGAGGGAGTGGGAGTGTGTACCTTGGAAGAGCATGGGGTAACTATTCAAGAGTTATTTACTCAAATTGCTACATGGATGACATCATCAATCCTCAAGGCTGGTCTGAATGGAACCATCCAGAAAGAAAAAAGACTGCAGTGTTTGGTGAATATAAGAACATGGGAAGAGGAGCAGATAGGAAAGAGAGAGTGCCATGGTCAAAAGCATTCAACTATGAAGAAGCAAGGCCTTTCCTTGGCAAGAGTTTCATCAATGGAGATCAATGGCTAAGACTCTAG 1074 0.3957 MVLSTKVQVNLAAEEGGYFNGNNVGDSNNDVNSYISWEDLEVGEESLELKSKKELRVIVVDQHGNKGHSKTVQGAVNMVPDHNKERVKIYIFPGTYREKVLVPKSKPYISFIGKRNGTASAVITWNSKSSDKGPNGQALGTYGSATVGIDSDYFCASQVTFENSVVAMPGGNGMQAVALRVNSNRAMFYKVKVKGTQDTLLDNTGTHYFYKCYIQGKIDFIFGSAKSLYEKCRLESIAESYGAIAAHHRDSAKQDTGFSFVGCKIRGSGSVYLGRAWGNYSRVIYSNCYMDDIINPQGWSEWNHPERKKTAVFGEYKNMGRGADRKERVPWSKAFNYEEARPFLGKSFINGDQWLRL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241831g00017 357 FunFam Pectinesterase 53 357 - -
Stsc241831g00017 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 51 356 - -
Stsc241831g00017 357 Pfam Pectinesterase 59 352 IPR000070 GO:0030599|GO:0042545
Stsc241831g00017 357 Gene3D - 53 357 IPR012334 -
Stsc241831g00017 357 SUPERFAMILY Pectin lyase-like 57 355 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241831g00017 Stsc-Chr241831 72124 73900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241831g00017 28 309 Carbohydrate Esterase AT5G55590 57.947 2.45e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241831g00017 K01051 - gmx:100804220 511.916