Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241831g00016 ATGACTAGTAGTTATAACAAGAGATTATTATTATTATTGCTGGCTATTATGGTTATCATGGTAAATGGTGATGATGTTAGTAGCATAAACATGATTAGTTGGGATGATCTAATGGTTGATGAAGAGAGTCTTTCATACAACAATAATAATGGTGGACAAGTTTTTGTTGTTGATCAAGCTGGTAATGGAGATTCAACAACAGTTCAAGGTGCTGTTGATATGGTCCAACAAAACAACCCACAAAGAGTCAAGATTTATATATATCCCGGAATTTACAGAGAAAGAGTTCATGTGCCAAAAAACAAGCCATATATTTCATTTATAGGTAAACCAATGATGATGATGAATGTAACAGACAGTGGGAGTGGCATACTACTACCTGTTATTACAAATAGCACAAAGGCATCAGACAAAGGTTCATGGGAGGGGCAAGAATTAGGCATGTCTAATACAGCAACTCTTTGGGTTCAATCTAATTTCTTCTGTGCAACTGCTCTTACCGTAGAGAATTTGGTAGAGAAAGATGGAGATAGAAGGCAGGCAGTGGCATTGAGGGTAGATAGTGATAAAGCTGTATTCTACCAAGTTAAGGTTGTTGGGGAACAGGACACTCTCCTAGATAACAAAGGAACCCATTATTTCTACCAAAGTTACATCCAAGGATCTGTTGATTTCATTTGTGGCCAAGCAAAATCACTCTTTCATGAGTGTGTACTATACTCGATAGCTGAGGATTCGGGAGCAATTGCAGCTCATCATAGAAATTCAGCAGAAGAAGACACAGGATTCTCATTTGTTAATTGCAGAATCAAAGGAAATGGTAGAATCTTGCTTGGGAGAGCTTGGGGAGAATATTCAACAACAACATATTCCTTCTGTGAAATGGATGATATCATTAACCCCATTGGTTGGAGTGATTGGAATGTTCCATCTAGACAACAGAATGCAGTATTTGGTGAGTATCAGTGTTATGGAAAAGGATCAAATAGAACTGGAAGGGTAGAATGGTCAAAAGAGTTGAGCAGTGAAGAAGCTATGCCTTTTCTTGATACAAATTATATAAATGGAGATCAATGGCTTAGATTACAATAA 1092 0.3727 MTSSYNKRLLLLLLAIMVIMVNGDDVSSINMISWDDLMVDEESLSYNNNNGGQVFVVDQAGNGDSTTVQGAVDMVQQNNPQRVKIYIYPGIYRERVHVPKNKPYISFIGKPMMMMNVTDSGSGILLPVITNSTKASDKGSWEGQELGMSNTATLWVQSNFFCATALTVENLVEKDGDRRQAVALRVDSDKAVFYQVKVVGEQDTLLDNKGTHYFYQSYIQGSVDFICGQAKSLFHECVLYSIAEDSGAIAAHHRNSAEEDTGFSFVNCRIKGNGRILLGRAWGEYSTTTYSFCEMDDIINPIGWSDWNVPSRQQNAVFGEYQCYGKGSNRTGRVEWSKELSSEEAMPFLDTNYINGDQWLRLQ 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241831g00016 363 Gene3D - 53 363 IPR012334 -
Stsc241831g00016 363 FunFam Pectinesterase 50 362 - -
Stsc241831g00016 363 SUPERFAMILY Pectin lyase-like 54 361 IPR011050 -
Stsc241831g00016 363 Pfam Pectinesterase 56 357 IPR000070 GO:0030599|GO:0042545
Stsc241831g00016 363 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 35 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241831g00016 Stsc-Chr241831 67615 70250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241831g00016 9 314 Carbohydrate Esterase AT5G55590 52.695 7.98e-107 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241831g00016 K01051 - gmx:100775690 507.679