LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc241831g00015	ATGAAGAGAGTCTTTCATACAACAATAATAATGGTGGACAAGTTTTTGTTGTTGATCAAGCTGGTAATGGAGATTCAACAACAGTTCAAGGTGCTGTTGATATGGTCCAACAAAACAACCCACAAAGAGTCAAGATTTATATATATCCCGGAATTTACAGGTAAACCAATGATGATGATGAATGTAACAGACAGTGGGAGTGGCATACTACTACCTGTTATTACAAATAGCACAAAGGCATCAGACAAAGGTTCATGGGAGGGGCAAGAATTAGGCATGTCTAATACAGCAACTCTTTGGGTTCAATCTAATTTCTTCTGTGCAACTGCTCTTACCGTAGAGAATTTGGTAGAGAAAGATGGAGATAGAAGGCAGGCAGTGGCATTGAGGGTAGATAGTGATAAAGCTGTATTCTACCAAGTTAAGGTTGTTGGGGAACAGGACACTCTCCTAGATAACAAAGGAACCCATTATTTCTACCAAAGTTACATCCAAGGATCTGTTGATTTCATTTGTGGCCAAGCAAAATCACTCTTTCATGAGTGTGTACTATACTCGATAGCTGAGGATTCGGGAGCAATTGCAGCTCATCATAGAAATTCAGCAGAAGAAGACACAGGATTCTCATTTGTTAATTGCAGAATCAAAGGAAATGGTAGAATCTTGCTTGGGAGAGCTTGGGGAGAATATTCAACAACAACATATTCCTTCTGTGAAATGGATGATATCATTAACCCCATTGGTTGGAGTGATTGGAATGTTCCATCTAGACAACAGAATGCAGTATTTGGTGAGTATCAGTGTTATGGAAAAGGATCAAATAGAACTGGAAGGGTAGAATGGTCAAAAGAGTTGAGCAGTGAAGAAGCTATGCCTTTTCTTGATACAAATTATATAAATGGAGATCAATGGCTTAGATTACAATAA	927	0.3851	MKRVFHTTIIMVDKFLLLIKLVMEIQQQFKVLLIWSNKTTHKESRFIYIPEFTGKPMMMMNVTDSGSGILLPVITNSTKASDKGSWEGQELGMSNTATLWVQSNFFCATALTVENLVEKDGDRRQAVALRVDSDKAVFYQVKVVGEQDTLLDNKGTHYFYQSYIQGSVDFICGQAKSLFHECVLYSIAEDSGAIAAHHRNSAEEDTGFSFVNCRIKGNGRILLGRAWGEYSTTTYSFCEMDDIINPIGWSDWNVPSRQQNAVFGEYQCYGKGSNRTGRVEWSKELSSEEAMPFLDTNYINGDQWLRLQ	308

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc241831g00015	308	Pfam	Pectinesterase	59	302	IPR000070	GO:0030599\|GO:0042545
	Stsc241831g00015	308	PANTHER	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	61	306	-	-
	Stsc241831g00015	308	SUPERFAMILY	Pectin lyase-like	59	306	IPR011050	-
	Stsc241831g00015	308	Gene3D	-	46	308	IPR012334	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc241831g00015	Stsc-Chr241831	67372	70143	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc241831g00015	73	259	Carbohydrate Esterase	AT5G55590	61.376	8.46e-76	233

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc241831g00015	K01051		-	gmx:100775690	387.111