Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241831g00012 ATGCTAAGTCTCATCATCATCATCATTTCAATCTCTTTGATCCTAAAACTGGGAAGAGCCTCAAAAAATCTTCCACCAGGGCCATGGAAGCTTCCAATCTTGGGTAGCTTACACCACCTCATCGGCGGCCTCCCACATCGCCGGCTAAGAGATTTGTCCAAGAAACATGGCCCCATAATGCACATGCAGCTTGGAGAGACATCAGTCATTGTAGCTTCTTCACCTGAGATTGCCAAAGAGGTCTTGAAAATCCATGACCCTGCCTTTGCTCAACGGCCTCAGCTCGCCGCCGCCGAAGCTATAACTTACAGCTACACCAACCTCACGCATTCACCCTATGGAGACTACTGGAGGCACATACGAAGAATTTGCACGCTAGAATTGCTCATTGCTAAGCGTGTGAGATCATTTCAATCCATAAGAATGGAAGAAACTTCAAGCTTAGTGAGATTTGTTTCTAGAAACATTGGTTCTGCTATCAACCTTAGCGATAAGCTTCTTAGCATGACATATAGCATCACTTCAAAGGCCACTTTGGGTTCCAAAAGCGAAGAGCAGGAAAAGTTGTTAATCTGTTGCATGAAGAAGATTTTGAGAACTAATGAAAATTTCAATGTTAGTAACATTTTCCCTTCCCAGAAGTGGCTGCAAGGGATTATTGGAGCCACCAGTGAATTGGAGGAGTTACATAGAATAAGTGATAGAGTTCTTGATGACATCATTGCTGCAGCAACAACAACAACAACCAATAATACTGTTAATGCACATGCTAATACTCTTCTCTCTTTCCTTTTGAGGAGTCTCAAGGATAACGGTACCTCTGAATTTCAACTCTCAAGAAACAACATTAAAGCTCTTCTTAGGGACATGCTACTTGCTGGAAGTGAGACATCATCTTCAACTATGGAATGGGCTTTTTCAGAAATGATGAAAAATCCAAGAGTGCTAAAAAAGGCACAAGCAGAAGTTAGACAAGTTTTTGGTAACAAAGTTATTAAAGAAAGTATGAGACTGCATCCTCCAGGTGGTGCTTTACTTGCAAGAGAATGTCGTGAGACTTGTGAGATCAATGGATACACAATACCAGCTGGAACCCAAGTGCTTGTGAATACATGGGCAATTGGAAGAGATTCCAAGTATTGGAATGAAGCTGAGAGATTCTATCCTGAGAGATTCTTAGATTGTGAAATTGAATACAAAGGGTCACATTTTGAATTCATCCCATTTGGTGCAGGGAAGAGAATGTGTCCTGGCATCTCATATGCTCTACCTAGTATTGAACTTGCACTTGCACAGTTGCTATACCATTTTGATTGGGATCTTCCTTCTGGAGTCAGTCATGAGAATTTTGACATGATGGAGGCTTTTGGGGTTACTATGAGGAGGAAAAATGACCTATTTGTAATTCCCATTTGCCAACTTCATGTGCCAATTGAACAATTATAA 1446 0.4136 MLSLIIIIISISLILKLGRASKNLPPGPWKLPILGSLHHLIGGLPHRRLRDLSKKHGPIMHMQLGETSVIVASSPEIAKEVLKIHDPAFAQRPQLAAAEAITYSYTNLTHSPYGDYWRHIRRICTLELLIAKRVRSFQSIRMEETSSLVRFVSRNIGSAINLSDKLLSMTYSITSKATLGSKSEEQEKLLICCMKKILRTNENFNVSNIFPSQKWLQGIIGATSELEELHRISDRVLDDIIAAATTTTTNNTVNAHANTLLSFLLRSLKDNGTSEFQLSRNNIKALLRDMLLAGSETSSSTMEWAFSEMMKNPRVLKKAQAEVRQVFGNKVIKESMRLHPPGGALLARECRETCEINGYTIPAGTQVLVNTWAIGRDSKYWNEAERFYPERFLDCEIEYKGSHFEFIPFGAGKRMCPGISYALPSIELALAQLLYHFDWDLPSGVSHENFDMMEAFGVTMRRKNDLFVIPICQLHVPIEQL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241831g00012 481 SUPERFAMILY Cytochrome P450 25 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00012 481 FunFam Cytochrome P450 99A2 15 471 - -
Stsc241831g00012 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Stsc241831g00012 481 Gene3D Cytochrome P450 16 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00012 481 Pfam Cytochrome P450 25 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00012 481 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00012 481 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00012 481 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00012 481 CDD CYP71-like 55 466 - -
Stsc241831g00012 481 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00012 481 PRINTS E-class P450 group I signature 77 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00012 481 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00012 481 PRINTS E-class P450 group I signature 53 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00012 481 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00012 481 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00012 481 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00012 481 PANTHER CYTOCHROME P450 71B11-RELATED 14 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241831g00012 Stsc-Chr241831 57759 60313 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241831g00012 25 474 Cytochrome P450 AT3G26320 39.286 2.88e-113 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241831g00012 - K23807 gmx:100779851 501.13