Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241831g00007 ATGGAGAATCATCACCCCTCATCATTATTCTCATCATCCTTACCCTTCTTTTTATTTTCATCACTAATCTTCATCCTTTTCATATCACAAGTTCTCAAATTGTTAGCTAAGAAATCCAAAGCCACAAGCAAGAAAACAAAGCCAAACCTTCCCCCCGGGCCATGGACACTACCTATAATTGGTAGCATACACCACTTCATTGGAAATTCTCTACCCCATCGTTGTATGAGAGACTTAGCAAGAAAATATGGTCCTCTCATGCACCTTAAGCTCGGCGAAACATCGGTCATGGTGGTTTCTTCTCCAGAAGTTGCCAAAGAAGTGTTTAAAAAGTATGATGTCAACTTTTCCGAAAGGCCTAAACATTTAGGTGCAGATATCTTGACCTATGGCTCCACAAACATAGCCACCTCGCAATACGGTGGCTATTGGAAGCAACTAAGAAAAATAGCCACAATGGAACTTCTTAGCCCTAAGCGCGTGTCTTCGTTCAAATCAATAAGAGAAGAAGAGGACCTATTTGGTGCGGGAATTGAAACATCATCTGGAGTGATAGAATGGACTATGTCCGAGCTAATGAAGAATCCAAGAGCAATGGCAAGAGCTCAAGAAGAAGTTAGAACAGTATTCGGAGTCAATGGATTCACCAATGAACCATCATCACCATCTCTTGAGAAACTAACATATCTAAAAGCGGTTATCAAAGAAACAATGAGATTACACCCACCATTTCCACTACTCCTACCAAGAGAATGCAGAGAGACATGCGAGATCAATGGATACACCATAGCCGCAGGAACACAAGTCATAGTGAATGCATGGGCCATCGGAAGAGATCCTAAGCATTGGGGAGGCGAAGAAGACGCTGAGATTTTCCGGCCGGAAAGGTTTCTAGAAAGTTCCATTGATTACAAAGGTTCCGATGTTGAGTTCATACCGTTTGGTGCTGGGAGAAGAATATGTCCGGGGATTTATTTTGCTGTTGCCAGCATTGAGAGTTGTGTTGCGCAACTTTTGTATTATTTTGATTGGAAGGTTCCAGAAGATGGAGAGATGGATATGAGTGAGTATTTTGGGAGCACGGCAAGAAGGAAGAATGATCTTATCTTAGTTCCAATTCCATGGAAGAATAAATAA 1137 0.4178 MENHHPSSLFSSSLPFFLFSSLIFILFISQVLKLLAKKSKATSKKTKPNLPPGPWTLPIIGSIHHFIGNSLPHRCMRDLARKYGPLMHLKLGETSVMVVSSPEVAKEVFKKYDVNFSERPKHLGADILTYGSTNIATSQYGGYWKQLRKIATMELLSPKRVSSFKSIREEEDLFGAGIETSSGVIEWTMSELMKNPRAMARAQEEVRTVFGVNGFTNEPSSPSLEKLTYLKAVIKETMRLHPPFPLLLPRECRETCEINGYTIAAGTQVIVNAWAIGRDPKHWGGEEDAEIFRPERFLESSIDYKGSDVEFIPFGAGRRICPGIYFAVASIESCVAQLLYYFDWKVPEDGEMDMSEYFGSTARRKNDLILVPIPWKNK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241831g00007 378 SUPERFAMILY Cytochrome P450 51 374 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00007 378 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 314 323 IPR017972 GO:0005506|GO:0016705
Stsc241831g00007 378 Gene3D Cytochrome P450 42 167 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00007 378 FunFam Predicted protein 174 370 - -
Stsc241831g00007 378 Gene3D Cytochrome P450 168 370 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00007 378 PRINTS P450 superfamily signature 321 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00007 378 PRINTS P450 superfamily signature 312 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00007 378 PRINTS P450 superfamily signature 232 243 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00007 378 PRINTS P450 superfamily signature 176 193 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00007 378 PANTHER CYTOCHROME P450 71B11-RELATED 172 373 - -
Stsc241831g00007 378 PRINTS E-class P450 group I signature 311 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00007 378 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00007 378 PRINTS E-class P450 group I signature 231 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00007 378 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00007 378 PRINTS E-class P450 group I signature 321 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00007 378 Pfam Cytochrome P450 51 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00007 378 Pfam Cytochrome P450 172 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241831g00007 Stsc-Chr241831 40447 43516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241831g00007 19 373 Cytochrome P450 AT3G26180 38.933 4.71e-75 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241831g00007 - K23807 sstn:125850682 296.204