Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241831g00005 ATGAGAGACTTAGCACAAAAATATGGCCCTCTCATGCATGTTAAGCTTGGAGAAGCATCCATCATGGTGGTTTCTTCTCCCGAAGTTGCCAAAGAAGTGTTGGTAACCTACGATACCATTTTCATCGAAAGGCCTAAACAAATTGGCGGCGATATCATATGCTATGGTTCAACGGACATAGCCACCGCGCGATACGGTGGCTATTGGAAGCAGCTAAGAAGAATATCGTCAATGGAACTTCTCGGCCCTAAACGTGTCCGTTCATTCAAATCAATAAGGGAAGAAGAGGTAATGAATTTGATAACATGGATTTCAACTAATAACAATAATGGATCTTGTGTTAATCTTAGTGAGAAAGTTGCGTCCATGACATGTGCAATCACATCTAGGGCAACTATTGGGGAAAAGTGCAAGGACCAAGAAGAGTTCATTTTATTGATGAAGAAACTTGGAAAGGTTTCTCAACGTTTATTCGTTGTGTTTGAACTTTTTCCATCTTACACATGGCTCCATCGCATAAGTAGAGTTCGGTCTGAAGCGGAAAAGTTGCACAAAGAATTTGATGTGATTATTGAAAACATCATTGGAGAAAAACTAAAAAAGAAGAGGAATGGTGGTAGTGGTGATGAATCTAATAATAAGGTAGATGATCTTCTTTCTATTCTCCTAAATCTTGTTGAAGATCATGGCGCCCTTGAGTTTCCCTTGACAATGGACAACGTCAAAGCTGTTGTTTTTGACATATTTGCTTCCGGAATTGAAACATCATCTGCAATGATAGAATGGACAATTTCGGAGCTGGTTAAGAACCCTAAAGCAATGGCAAGAGCTCAAGAAGAAGTTAGAAAAGCTTTTAATAGTAGTTCTGTTGAAGAACTAACTTATCTGAAAGCGGTTATCAAAGAGACGCTGAGATTACACCCTCCATTTCCACTACTCCTTCCAAGAGAATGCAGAGAGACATGTGAGATCAATGGATACACCATAGCCAAAGGAAGCAGATTGATAGTAAATGCATGGGCGATGGGGAGAGATCCTAAGTATTGGGGCGGCGAAGAAGACGCTGAGAGTTTCTGGCCGGAAAGGTTTCTAGAGGGTTCCATTGATTACAAAGGTTCGAATGTTGAGTTCATACCATTTGGTGCTGGGAGAAGGATATGTCCAGGGATTGATTTCGCTGTTTCCAGCATTGAACTTTGTGTTGCTCATCTTCTTTATTATTTCAATTGGCAAGTTCCTAACAATGGAGAGATGGATATGGCTGAAGAATTGGAAATCACAGTAAGAAGGAAGAATGATCTTATCTTAGTTCCGATTCCATGGAATAATAAGAATAATAATTAA 1344 0.3981 MRDLAQKYGPLMHVKLGEASIMVVSSPEVAKEVLVTYDTIFIERPKQIGGDIICYGSTDIATARYGGYWKQLRRISSMELLGPKRVRSFKSIREEEVMNLITWISTNNNNGSCVNLSEKVASMTCAITSRATIGEKCKDQEEFILLMKKLGKVSQRLFVVFELFPSYTWLHRISRVRSEAEKLHKEFDVIIENIIGEKLKKKRNGGSGDESNNKVDDLLSILLNLVEDHGALEFPLTMDNVKAVVFDIFASGIETSSAMIEWTISELVKNPKAMARAQEEVRKAFNSSSVEELTYLKAVIKETLRLHPPFPLLLPRECRETCEINGYTIAKGSRLIVNAWAMGRDPKYWGGEEDAESFWPERFLEGSIDYKGSNVEFIPFGAGRRICPGIDFAVSSIELCVAHLLYYFNWQVPNNGEMDMAEELEITVRRKNDLILVPIPWNNKNNN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241831g00005 447 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 PRINTS P450 superfamily signature 251 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 PRINTS P450 superfamily signature 378 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 PRINTS E-class P450 group I signature 387 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 PRINTS E-class P450 group I signature 297 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 PRINTS E-class P450 group I signature 240 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 PRINTS E-class P450 group I signature 377 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 PRINTS E-class P450 group I signature 5 24 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 PRINTS E-class P450 group I signature 29 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 PRINTS E-class P450 group I signature 260 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 SUPERFAMILY Cytochrome P450 1 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 FunFam Cytochrome P450 99A2 1 439 - -
Stsc241831g00005 447 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 380 389 IPR017972 GO:0005506|GO:0016705
Stsc241831g00005 447 Gene3D Cytochrome P450 1 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 Pfam Cytochrome P450 1 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00005 447 CDD CYP71-like 7 434 - -
Stsc241831g00005 447 PANTHER OS08G0105600 PROTEIN 2 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241831g00005 Stsc-Chr241831 24471 26651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241831g00005 1 438 Monolignol Biosynthesis Gene Families AT4G36220 37.118 1.29e-99 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241831g00005 - K23807 gmx:100779851 547.74