Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241831g00004 ATGGAACATCATCACTCCTCATCTTTAATCTCTTCCTTACCCTTCTTTTTATTTTCATTACTAGGCTTCATCCTTTTCATATCACAACTTCTCAAACTTTTAGCCAAGAAATCCAAAGCCCTAAGCAAGAAAACAACACCAAACCTTCCCCCCGGGCCATGGACACTACCTCTAATCGGTAGCATACACCACTTCTTTGGAAAATCTCCACCCCATCATCGCTTGAGAGACTTAGCACAAAAATATGGTCCTCTCATGCACCTTAAGCTCGGCGAAGCATCAATCATGGTGGTTTCTTCTCCCGAAGTTGCCAAAGAAGTGTTTAAAACCTACGACACCATTTTCGCCGAAAGGCCTAAGCAGTTAATCGGTTCAGATATCTTGTGCTATGGCTCCACGGACATAGCCATGGCGCGATACGGCGGGTATTGGAAGCAATTAAGAAGAATATCTTCGGTGGAACTTCTTGGCCCTAAACGTGTCCGTTCATTCAAATCAATAAGGGAAGAAGAGGTAATGAATTTGATAACATGGATTTCAGCTAACAATGGATCTTGTGTTAATCTTAGTAAGAAAGTTGCTTCCATGACAAGTGCAATCACTGCTAGGGCAACTTTTGGGGAAAAGTGTAAGGATGAAGAAGAGTTCATTTTGCTGTTGAAGAATCTTGGAAAAATTGTTGAACGTTTATTTGTTGTGTTTAGTCTTTTTCCATCTCACACATGGCTTCACCTCATAAGTAGAACTCAGTATGAAGCAGAAAAATTGCATAAAGAATTTGATATGATTGTTGAAAACATCATTGGAGAAAAACTAAAAAAGAAGAGGAATGGTAGTAGTGGAGAAGAATCATCTAAAGTAGAGGATCTTCTTTCTATACTCCTAAATCTTGTTGAAGATCATGGCACCCTTGAGTATCCCTTGACAATGGACAACGTCAAAGCTATTGTATTTGATATGTTTGTTGCCGGAGTTGAAACATCATCTGCAGTCATAGAATGGGCAATTTCGGAGCTAGTGAAGAACCCTAAAGCAATGGCAAGAGCTCAAGAAGAAGTTAGAAAAGCTTTTGGCAACAATGGATACACAAAAGAATCATCATCAGCTCTTGAGAATCTAACATATCTAAGAGCAGTTATCAAAGAGACACTGAGATTACACCCACCATTTCCCATACTCCTTCCAAGAGAATGTAGAGAGACATGTGAGATCAACGGATATACCATAGCAGCAGGAAGCAAAGTGATAGTGAATGCATGGGCGATTGGAAGAGATCCTAAGTATTGGGGCGGCGAAGAAGATGCCGAGAGTTTTCGGCCGGAAAGGTTTCTGGAAAGTTCCATTGATTACAAAGGTTCCAATTTTGAGTTCATACCTTTTGGTGCTGGGAGAAGGATATGTCCAGGCTTGTATTTTGCTGTTTCCAGCATTGAACTTTGTGTTGCTCATCTTCTTTATTATTTCAATTGGCAAGTTCCTAATGATGGAGAAGAGTTGGATATGACTGAAGATTTGGGAAGCACAGCAAGAAGAAAGAATGATCTTTTCCTAGTTCCAATGGCTTGGAATGATAGCAATAATAATATATAA 1590 0.3987 MEHHHSSSLISSLPFFLFSLLGFILFISQLLKLLAKKSKALSKKTTPNLPPGPWTLPLIGSIHHFFGKSPPHHRLRDLAQKYGPLMHLKLGEASIMVVSSPEVAKEVFKTYDTIFAERPKQLIGSDILCYGSTDIAMARYGGYWKQLRRISSVELLGPKRVRSFKSIREEEVMNLITWISANNGSCVNLSKKVASMTSAITARATFGEKCKDEEEFILLLKNLGKIVERLFVVFSLFPSHTWLHLISRTQYEAEKLHKEFDMIVENIIGEKLKKKRNGSSGEESSKVEDLLSILLNLVEDHGTLEYPLTMDNVKAIVFDMFVAGVETSSAVIEWAISELVKNPKAMARAQEEVRKAFGNNGYTKESSSALENLTYLRAVIKETLRLHPPFPILLPRECRETCEINGYTIAAGSKVIVNAWAIGRDPKYWGGEEDAESFRPERFLESSIDYKGSNFEFIPFGAGRRICPGLYFAVSSIELCVAHLLYYFNWQVPNDGEELDMTEDLGSTARRKNDLFLVPMAWNDSNNNI 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241831g00004 529 CDD CYP71-like 81 515 - -
Stsc241831g00004 529 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00004 529 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00004 529 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00004 529 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00004 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00004 529 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00004 529 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00004 529 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00004 529 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00004 529 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00004 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Stsc241831g00004 529 FunFam Cytochrome P450 99A2 39 520 - -
Stsc241831g00004 529 Pfam Cytochrome P450 50 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00004 529 PANTHER CYTOCHROME P450 71B11-RELATED 28 520 - -
Stsc241831g00004 529 Gene3D Cytochrome P450 41 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00004 529 SUPERFAMILY Cytochrome P450 48 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241831g00004 Stsc-Chr241831 18716 20619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241831g00004 37 518 Cytochrome P450 AT3G48310 37.810 8.92e-114 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241831g00004 - K23807 gmx:100779851 639.417