Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241831g00003 ATGCTCAACCTTGTTGGGTCAATGCCCCATGAAACCCTAAGAAACTTAGCATCAAAATATGGACCCTTAATGCCCCTTAAACTAGGAGAAATCTCCAACATCATAGTTTCTTCACCTGAAATGGCACAAGAGATTATGAAAACTCAAGATCTCAACTTTGTTGATAGGCCAAACCTTCTATTTCCAAGAATCATGAATTACAATTGCACAGGCATTGCATTTGGAAACTATGGAGACTATTGGAGGCATGTACGGAAGATATGCACCATGGAGTTATTAACAGCAAAGCGTGTTCAATCTTTTAGGCATATAAGAGAAGAAGAGGTTTCAAAATTGGTCAAAGCAATATCTCAAAGTGAAGGCTCCATTTTTAATCTCACTCAGAAAATTTTTTCAATGACCTATGGAATAGCGGCTAGAGCAGCATTTGGTAAAAAATATAGCTACCAGGAAGCATTTATATCATCTATTGAGGAAGCATTGCATCTATCAGGAGAAAATTTTATTGGTGATCTGTATCCTTCAATGAGAGTAGTACTTGAAATGATGAGTAGAACGAAGGCCAAGCTTAAAGAACTGCACAAAAAGACTGATAAGATATTGCAAGACATCATAGATGATCATAGAAATAGAAGTGGCAGATGTGAAGAAGAAGGTGAAGATCTAGTTGATGTTCTTCTCAAGTTTCAACAAAAAGACTCTGCATACCCCTTGACTGATGACAACATCAAAGCAGTCATCCAGGACATGTTTAGTGGTGGTGGAGAAACATCCTCATCGGTTGTGGATTGGGCAATGGCTGAAATGATAAAGAAACCAAACAAGCTGAAATTAGAAGGGTTTATGCTAACAAAGGCTGCGCCATTGTTAATTCCAAGAGAGAACAAAGAACCATGCCAAATCAAAGGGTACAAAATTCCAGCCAATTCTAGGATTATTATCAATGTTTGGGCAATTGGAAGAGATCCAAAGTATTGGGATGATGCCATGAATTTTAAGCCTGAGAGGTTTCTTGATAATTATTCAATTGATCAAAGGGGAACAAATTTTGAGTTTATTCCATTTGGTGGTGGAAGAAGAATGTGTCCCGAGATTGCATTTGCTACACCAAACATGCCACTTACTAAATTGCTTTACCATTTTGATTGGAAGCTTCCTAATGAAATCAAGAATGAGGAACTTGATATGACTGAGTTGTTTGGGATCACTATTAGAAGAAAAAATGATCTCTGCTTGATTCCCATTATTCATCGACTTTAA 1260 0.373 MLNLVGSMPHETLRNLASKYGPLMPLKLGEISNIIVSSPEMAQEIMKTQDLNFVDRPNLLFPRIMNYNCTGIAFGNYGDYWRHVRKICTMELLTAKRVQSFRHIREEEVSKLVKAISQSEGSIFNLTQKIFSMTYGIAARAAFGKKYSYQEAFISSIEEALHLSGENFIGDLYPSMRVVLEMMSRTKAKLKELHKKTDKILQDIIDDHRNRSGRCEEEGEDLVDVLLKFQQKDSAYPLTDDNIKAVIQDMFSGGGETSSSVVDWAMAEMIKKPNKLKLEGFMLTKAAPLLIPRENKEPCQIKGYKIPANSRIIINVWAIGRDPKYWDDAMNFKPERFLDNYSIDQRGTNFEFIPFGGGRRMCPEIAFATPNMPLTKLLYHFDWKLPNEIKNEELDMTELFGITIRRKNDLCLIPIIHRL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241831g00003 419 PANTHER OS08G0105600 PROTEIN 12 276 - -
Stsc241831g00003 419 CDD CYP71-like 19 410 - -
Stsc241831g00003 419 Gene3D Cytochrome P450 279 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00003 419 Pfam Cytochrome P450 6 274 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00003 419 Pfam Cytochrome P450 285 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00003 419 SUPERFAMILY Cytochrome P450 5 413 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00003 419 PRINTS E-class P450 group I signature 133 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00003 419 PRINTS E-class P450 group I signature 41 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00003 419 PRINTS E-class P450 group I signature 352 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00003 419 PRINTS E-class P450 group I signature 315 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00003 419 PRINTS E-class P450 group I signature 17 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00003 419 PRINTS E-class P450 group I signature 242 259 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00003 419 PRINTS E-class P450 group I signature 274 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00003 419 Gene3D Cytochrome P450 1 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241831g00003 Stsc-Chr241831 9638 12732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241831g00003 2 414 Cytochrome P450 AT3G26300 36.484 3.68e-101 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241831g00003 - - adu:107496273 603.594