Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241831g00002 ATGCACAACCTTGTTGGGTCAATGCCCCATGAAGCCCTAAGAAACTTAGCATCAAAATATGGACCCTTAATGCACCTTAAACTAGGAGAAATCTCCAACATCATAGTTTCTTCACCTGAAATGGCACAAGAGATTATGAGAACTCAAGATCTCAACTTTTGTGATAGGCCAAGCCTTCTCTTTCCAAGAATCATAGCTTACAACGGCACAGGCATTGCCTTTGGAAGATATGGAGATTATTGGAGGTATGTAAGGAAGATATGCACCATGGAGTTATTAACAACAAAACGTGTTCAATCTTTTAGGCATGTAAGGGAAGAAGAGGTTTCAGAGTTGGTCAAAGCAATATCTCAAAGTGAAGGCTCCATTTTTAATCTCACTCAGAAGATTTTCTCAATGACCTATGGAATAGCAGCTAGAGCAGCATTTGGTAAAAAATATAGCTATCAAGAAGCTTTTATATCATCTATTGAGGAAGCATTGCATCTAGCTGGAGAAAATTATATTGGTGATCTGTATCCTTCAATTAGAGTAGTACTTGAAATGATGAGTAGAACGAAGGCTAAGCTTGAAGAACTGCACAGAAAGACTGATAAGATATTGCAAGAGATAATAGATGATCATAGAAATAGAAGAACAAGTGGCAAATGTGATGAAGAAGAAGGTGAAGATCTGGTTGATGTTCTTCTCAAGTTTCAAGAAAAAGACTCTGAATACTCCTTGACTGATGACAACATCAAAGCAGTCATCCAGGACATGTTTATTGGTGGTGGAGAAACATCCTCCTCGGTTGTGGATTGGGCAATGGCTGAAATGATAAAGAAACCAAAAGTGATGGAAAGAGCACAAGCTGAAGTTAGAAGGGTTTATGGTAACAAAGGGTTTGTGGATGAATCAGAATTACACCAATTGATATACCTCAAGTGTATCATCAAAGAAACCCTAAGGTTACATCCATCTGTGCCATTGTTAGTTCCAAGAGAGAACAAAGAACCATGCCAAATCAAAGGGTACAAAATTCCAGCCAATTCTAGAATTATTATCAATGCTTGGGCAATTGGAAGAGATCCAAAGTATTGGGATGATGCCAAGAATTTTAACCCTGAGAGGTTTCTTGATAATTATTCAATTGATCAAAGAGGCACAAACTTTGAGTTTATTCCATTTGGTGGTGGAAGAAGAATGTGTCCCGGGATTGCATTTGCCACACCAAATATGGAGTTGCCACTTGCTCAATTTCTTTACCATTTTGATTGGAAGCTTCCTAATGGAATCAAGAATGAGGAACTTGATATGACTGAGTTGTTTGGGATCACTATTAGAAGAAGAAATGATCTCTGCTTGATTCCCATTATTCATCATCAACCTTAA 1371 0.3793 MHNLVGSMPHEALRNLASKYGPLMHLKLGEISNIIVSSPEMAQEIMRTQDLNFCDRPSLLFPRIIAYNGTGIAFGRYGDYWRYVRKICTMELLTTKRVQSFRHVREEEVSELVKAISQSEGSIFNLTQKIFSMTYGIAARAAFGKKYSYQEAFISSIEEALHLAGENYIGDLYPSIRVVLEMMSRTKAKLEELHRKTDKILQEIIDDHRNRRTSGKCDEEEGEDLVDVLLKFQEKDSEYSLTDDNIKAVIQDMFIGGGETSSSVVDWAMAEMIKKPKVMERAQAEVRRVYGNKGFVDESELHQLIYLKCIIKETLRLHPSVPLLVPRENKEPCQIKGYKIPANSRIIINAWAIGRDPKYWDDAKNFNPERFLDNYSIDQRGTNFEFIPFGGGRRMCPGIAFATPNMELPLAQFLYHFDWKLPNGIKNEELDMTELFGITIRRRNDLCLIPIIHHQP 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241831g00002 456 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 389 398 IPR017972 GO:0005506|GO:0016705
Stsc241831g00002 456 PANTHER OS08G0105600 PROTEIN 12 454 - -
Stsc241831g00002 456 FunFam Cytochrome P450 99A2 1 451 - -
Stsc241831g00002 456 Gene3D Cytochrome P450 1 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 PRINTS E-class P450 group I signature 265 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 PRINTS E-class P450 group I signature 308 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 PRINTS E-class P450 group I signature 349 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 PRINTS E-class P450 group I signature 396 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 PRINTS E-class P450 group I signature 17 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 PRINTS E-class P450 group I signature 133 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 PRINTS E-class P450 group I signature 386 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 PRINTS E-class P450 group I signature 41 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 PRINTS E-class P450 group I signature 245 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 Pfam Cytochrome P450 7 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 Coils Coil 183 203 - -
Stsc241831g00002 456 PRINTS P450 superfamily signature 256 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 PRINTS P450 superfamily signature 309 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 PRINTS P450 superfamily signature 387 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241831g00002 456 CDD CYP71-like 19 446 - -
Stsc241831g00002 456 SUPERFAMILY Cytochrome P450 5 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241831g00002 Stsc-Chr241831 4363 8002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241831g00002 5 450 Cytochrome P450 AT3G26310 39.341 2.07e-128 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241831g00002 - - adu:107496273 775.778