Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241830g00004 ATGGCCGGCGTTAATCCTAACGGTGCCGCGGATTTCCCGGCGGTTCCGACTCACGGCGGACAGTTCATTCAGTACAACATCTTCGGTAACCTCTTCGAGGTCACCGCCAAGTACCGTCCTCCGATCATGCCTATCGGTCGTGGAGCTTACGGAATCGTTTGCTCCGTGTTGAATACTGAGACTAATGAGCTGGTTGCTGTTAAGAAGATAGCGAACGCGTTCGATAATCACATGGATGCGAAGCGTACACTCCGTGAGATTAAGCTCCTCAGGCATCTGGATCATGAAAATGTGATTGGTTTAAGAGATGTCATTCCTCCACCACTGCGTAGAGAGTTTAATGATGTCTATATTGCTACTGAGCTCATGGATACCGATCTTCATCACATTATTCGCTCCAATCAGGGCCTCTCGGAGGAACACTGCCAGTACTTCTTGTATCAGATTCTGCGTGGACTGAAGTACATACATTCGGCAAACATAATCCATAGAGATTTGAAGCCAAGCAATCTGTTGCTGAATGCAAATTGTGACTTGAAGATTATTGATTTTGGTCTTGCGCGGCCAACTATAGAAAATGATTTCATGACAGAGTATGTTGTCACAAGATGGTACAGGGCTCCTGAACTGCTGTTGAACTCGTCCGATTACACTTCTGCAATTGATGTTTGGTCCGTTGGTTGCATCTTTATGGAACTCATGAACAAAAAGCCCCTCCTTCCAGGGAAGGATCATGTGCATCAGATGCGCCTATTGACAGAGCTTCTTGGCACTCCAACTGAGGCAGACCTTGGGTTACTGAAAAGTGAGGATGCGAGAAGATATATCCGACAACTTCCTCAATATCCTCGCCAACCTTTAGCTAGGGTCTTCCCCCATGTTCATCCCTTGGCCATTGATCTTGTTGATAAAATGTTGACAATTGATCCAACTAAAAGAATTACAGGTAACTTTCTCAATATCCTTTTGTTTGTCTCTGTTTTATATAACTACTAA 996 0.4488 MAGVNPNGAADFPAVPTHGGQFIQYNIFGNLFEVTAKYRPPIMPIGRGAYGIVCSVLNTETNELVAVKKIANAFDNHMDAKRTLREIKLLRHLDHENVIGLRDVIPPPLRREFNDVYIATELMDTDLHHIIRSNQGLSEEHCQYFLYQILRGLKYIHSANIIHRDLKPSNLLLNANCDLKIIDFGLARPTIENDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLLPGKDHVHQMRLLTELLGTPTEADLGLLKSEDARRYIRQLPQYPRQPLARVFPHVHPLAIDLVDKMLTIDPTKRITGNFLNILLFVSVLYNY 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241830g00004 331 SMART serkin_6 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241830g00004 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Stsc241830g00004 331 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 315 - -
Stsc241830g00004 331 Pfam Protein kinase domain 44 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241830g00004 331 ProSiteProfiles Protein kinase domain profile. 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241830g00004 331 FunFam Mitogen-activated protein kinase 123 328 - -
Stsc241830g00004 331 SUPERFAMILY Protein kinase-like (PK-like) 44 315 IPR011009 -
Stsc241830g00004 331 Gene3D Transferase(Phosphotransferase) domain 1 123 316 - -
Stsc241830g00004 331 FunFam Mitogen-activated protein kinase 24 132 - -
Stsc241830g00004 331 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Stsc241830g00004 331 Gene3D Phosphorylase Kinase; domain 1 22 122 - -
Stsc241830g00004 331 ProSitePatterns MAP kinase signature. 74 177 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241830g00004 Stsc-Chr241830 22481 25667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241830g00004 10 315 MAP Kinase Gene Family AT3G45640 86.275 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Stsc241830g00004 Pkinase 1.2e-68 CL0016