Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241829g00008 ATGGAATTTCCAACAATAGTAGTTCTTCTCTTGTTGACACTATCAACAACATTGTCAAAAGCAGAACTTGATGCTAACTATTATGACAAAACATGTCCACAAATAGAGGACATAATCTCAGAGACGGTTCAAAGTGCTTCTAAGCAAGACCCTAAAGTCCCAGCACGTATTTTGAGGATGTTCTTCCATGACTGTTTTATAAGGGGATGTGATGCATCAATATTGTTGGATTCAACTGACACGAACAAAGCTGAGAAAGACGGGCCTCCAAATCTGTCTGTTCACTCATTTTACGTAATTGATGACGCAAAAGCAAAGCTTGAGAAAGCTTGCCCTCACACTGTTTCTTGTGCGGACATAATCGCCATTGCTGCCAGAGACGTTGTTACCTTGTCTGGAGGACCATCTTGGGAAGTTCTAAAAGGAAGAAAAGATGGAAGAATTTCAAAGGCATCAGACACCATAAACCTACCGGCTCCAACCTTGAATGTTACACAACTCATTCAAAGCTTCGCAAAGAGAGGCTTATCGGTCAAAGATTTGGTGGCCCTATCTGGTGGCCACACTCTCGGATTCTCTCACTGTTCTTCATTCCAATCTCGCATACACAACTTCAGTTTATTGAATGACATTGATCCAACTTTGAACACTAACTTTGCCCTAGGGCTCAAGAACAAGTGCCCTAAACCTAATACTACAGACCCTAATGCTGGTCAGTTCCTTGATTCAACTGCTTCTGTGTTTGATAATGATTACTTCATACAAATTTTGGGAGGAAAAGGCTTGTTTTCTTCGGATCAATCCCTAGTCGACGACTCAAGGACTAGATGGATCGTGGAAGCGTTTGCAAAAGATCAGAGTGTGTTCTTTAAGGAATTTGTGGATTCCATGTTAAAGCTTGGGAATGTAAGGGTGCTGGAGAATGGAGAAGTGAGACTCAATTGCAAGGTTGTGAATAATTGA 963 0.4143 MEFPTIVVLLLLTLSTTLSKAELDANYYDKTCPQIEDIISETVQSASKQDPKVPARILRMFFHDCFIRGCDASILLDSTDTNKAEKDGPPNLSVHSFYVIDDAKAKLEKACPHTVSCADIIAIAARDVVTLSGGPSWEVLKGRKDGRISKASDTINLPAPTLNVTQLIQSFAKRGLSVKDLVALSGGHTLGFSHCSSFQSRIHNFSLLNDIDPTLNTNFALGLKNKCPKPNTTDPNAGQFLDSTASVFDNDYFIQILGGKGLFSSDQSLVDDSRTRWIVEAFAKDQSVFFKEFVDSMLKLGNVRVLENGEVRLNCKVVNN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241829g00008 320 ProSiteProfiles Plant heme peroxidase family profile. 22 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 Pfam Peroxidase 41 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 FunFam Peroxidase 26 169 - -
Stsc241829g00008 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Stsc241829g00008 320 PANTHER - 5 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 SUPERFAMILY Heme-dependent peroxidases 23 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 CDD secretory_peroxidase 22 318 IPR033905 GO:0004601|GO:0042744
Stsc241829g00008 320 FunFam Peroxidase 158 300 - -
Stsc241829g00008 320 Gene3D - 26 319 - -
Stsc241829g00008 320 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241829g00008 320 Gene3D Peroxidase, domain 2 158 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241829g00008 Stsc-Chr241829 67962 69604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241829g00008 19 319 Peroxidase AT5G51890 70.764 3.99e-163 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241829g00008 K00430 - gmx:100795422 491.115