Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241829g00004 ATGAAAACAAGTAGCAGTGAAGTAGTTGGTGATATGTCTTCTCCAGCAAAGACACCAACATTGGTAGCAAGATTGATGGGTCTTGATCTTCTTCCACCTCCTTCTTCACCCTCTTGTTCTTCATCTTCATGCCTTTCCACACCAAATCTTCACCGCAAAAACATTCTCCTGTCCAAACACAGGAACAGCACTGATTGTGTTATGGTTGATTCATCACCAAGAACAGCATCACATCTTGACTACTATCACCACAGACTCTCCCTCCAAATCAACACCAACAAGGAGCAAGACTTGGAGATGCGGTTCTCATCATCAAAAAGGAACCATTTTGATTACAGCAACAACAATGTCTCTAATAGCAGAACAACAACAAGTTCTTCTTCTTCATCTTCTTCACCAAGCCACATGGCAAGGCAAATTGTGAAGCAAGTTAAGAAGAATGTGATGATGAACAATAATAATAGTAACAGAAAAGTTGGACAAGACATCACCAACACCCTCAAACCAAGAGAACAACTTGTTACCCAAATCAAACTTAAAAAGAAACTTTCTTCCAAGCCATCATCATCTTTTTCTCCAAGGTTAAGATTCATAGAAACCAAAAACACCAACCACACGCCAACTCCTCCACCACCACCACCACCAGTGGAAGAAGAGCTTCCAAGAGTTTTGATAAGGCCAAAGGAAGAACAAGAAGAAGAAGGGTCGTTGAAGCAGAACCAGAAATCATTAGTGACAAAATGTAATAATAAGAAGGTGAAGCATGAAAAGTTCAACTCAGCATCATCATCAAAGCTGAAAAAACAAGAGGAGTCATTCATAGTTCGACCACCAACAAATAGAAGCGGTGACATCATCATCAAGAATGCCATCACAAGAACCCATAACAACAAGAAGACTCATCCATTGTCCAACAATCTTCTCAATAACATCAACACTGTCGTCCCCAACCTTTTCCCTATCAAGATTGAAGCTTCTCCTCCATCAACCAAAATTAATCACAATAACAAGCAGACAGGGGTATGTGACAAAAGTAGCCCCCAACATCATCAGAGTCACAGGTACAAACAAGGAGGGATAATAAGCACACTCGCCACCCGAGAATTCAGCATAAACGACATCGTTCAAGCCAAAACCATTAACCACCATTCATATTCACCATCCACCACCGGAGAAGAACTTGCAGCAGCTGAATCTGAAAAGCATCATCACGGACCAGAATTTCAGTATATCACAGGAATCCTAAGCCGTACTTTTAACAAGGAAGAACAACTTGCCACCACAACAACAACAACAGGTCAACGCTTCTCTCATGACCACCTCGAAGAACACCCAATTTTGAACTCCCGTGTTTCCACTCCCCAGAACGTTAAAGATTGCATCTTTTCGATGACACAAAAACTGGGTCTGCGCTGGAATCGGAGGTTGATGTTTGACTTGGTGGATGAGGTGTTAATGGAGGTTGTTAGGCCTACAAAGAGTAGTAGTAGTAGGCTTTGGTTTTTGCATGGAAGTTGTTGTTGCTGTTGTTACCAAGGAACAACGGTTGAAGGATTAATGGAGAGAGTGTGGAAGAGGATAGGGAAGTTCCCATGCAAGAGGTGTGAGTTTTTGGAGGACATTGATGGGTTGATAGAATCAGAGGACATGGAGAAGGTGAAGGTGGATGTTGAAGATGGTTTGGAGGAAGAAGGAGAAAAGCTAGTGGCAGAGATTGAAGGGAACATTTGGAACACATTACTGCATGAATCCCTCATGCTTATCATCACTAGCTAA 1776 0.42 MKTSSSEVVGDMSSPAKTPTLVARLMGLDLLPPPSSPSCSSSSCLSTPNLHRKNILLSKHRNSTDCVMVDSSPRTASHLDYYHHRLSLQINTNKEQDLEMRFSSSKRNHFDYSNNNVSNSRTTTSSSSSSSSPSHMARQIVKQVKKNVMMNNNNSNRKVGQDITNTLKPREQLVTQIKLKKKLSSKPSSSFSPRLRFIETKNTNHTPTPPPPPPPVEEELPRVLIRPKEEQEEEGSLKQNQKSLVTKCNNKKVKHEKFNSASSSKLKKQEESFIVRPPTNRSGDIIIKNAITRTHNNKKTHPLSNNLLNNINTVVPNLFPIKIEASPPSTKINHNNKQTGVCDKSSPQHHQSHRYKQGGIISTLATREFSINDIVQAKTINHHSYSPSTTGEELAAAESEKHHHGPEFQYITGILSRTFNKEEQLATTTTTTGQRFSHDHLEEHPILNSRVSTPQNVKDCIFSMTQKLGLRWNRRLMFDLVDEVLMEVVRPTKSSSSRLWFLHGSCCCCCYQGTTVEGLMERVWKRIGKFPCKRCEFLEDIDGLIESEDMEKVKVDVEDGLEEEGEKLVAEIEGNIWNTLLHESLMLIITS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241829g00004 591 MobiDBLite consensus disorder prediction 383 403 - -
Stsc241829g00004 591 MobiDBLite consensus disorder prediction 328 355 - -
Stsc241829g00004 591 MobiDBLite consensus disorder prediction 200 219 - -
Stsc241829g00004 591 MobiDBLite consensus disorder prediction 107 137 - -
Stsc241829g00004 591 MobiDBLite consensus disorder prediction 327 355 - -
Stsc241829g00004 591 Pfam DUF761-associated sequence motif 6 33 IPR032795 -
Stsc241829g00004 591 MobiDBLite consensus disorder prediction 205 219 - -
Stsc241829g00004 591 Pfam Domain of unknown function (DUF4378) 407 583 IPR025486 -
Stsc241829g00004 591 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 13 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241829g00004 Stsc-Chr241829 32119 34501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241829g00004 3 584 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 28.639 2.12e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241829g00004 - - aip:107644757 707.597