Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241825g00011 ATGGCTGCTTCAGGCTCCGCCGCCACTGGTTCTCACTCCCGGAAAGGGCTCGGATTCATGCACTTTGATGACTCAGATGAGGAAAATGAAGCATTCAATCAACAACAATGGCAGCACAACGTTGAAGCTTTCTCTTTAGCTGGAAGTGTTGCTACTAAGGATTCTGAAATAGAATTTGGATTCTTAAGCAACACAGAGAAGCACAAAGAAAGGAAAGAAAAGAAAGGACTAATAAGCAATGATCAAGAAGATGAAGATTACATTTTGGCTGAAGCAAGGCAACCGCTGTGGCGAAAAGTACCGGTACCTTCGAGCCTAATCAATCCCTACAGGATAGTCATAGTCATGCGCCTCGTCGTGCTGGCATTCTTTTTTCGCTTCCGGATACTAAATCCAGTCCATGATGCATATCCACTTTGGTTGATCTCAGTAATTTGTGAAATATGGCTAGCATTGTCCTGGCTAGTTGATCAGCTACCAAAATGGTTCCCTATTACACGCGAAACCAGCCTCGAGCGATTGTCCTTGCGCTTCGAGCGAGAAGGAGAGCAGAACAAACTAGCCCCTGTTGATGTTTTTGTGACAACTGCAGACCCTTTTAAAGAACCACCAATCATAACAGCAAACACTGTCTTATCAGTGCTTTCTGTTGATTATCCAGTTGAAAAGGTTAACTGCTATGTCTCGGACGACAGCGCTTCAATGCTTCTCTATGATACTTTGTATGAAACTTCTGAGTTTGCAAGAATTTGGATCCCTTTTGTGAACAAGTACAGCATTGAGCCAAGGGCACCTGAGTTTTATTTCTCTCAGAAGGTTGATTACTTGAAAGACAAGGTTCATCCTACATTCGTAAGGGACCGCAGGGCCATGAAGAGAGAGTATGAAGAGTTTAAGGTGAGAATCAATGTGTTGATTTCAAAGGCTCAGAAGAAACCAGAAGAGGGTTGGGTGATGAAAGATGGAACACCTTGGCCTGGGAACAACACTGAAGATCATCCAGGAATGATTCAGGTGTGTTTGGGAAGTGCTGGTGCACTGGACAAAGATGGTAAACAACTGCCTCGGCTTGTTTATGTTTCGAGGGAGAAGCGCCCCGGCTATCAACACCACAAGAAAGCTGGTGCTATGAATGCTTTGGTTCGAGTTTCTGCAGTTCTTAGCAATGCTCCTTTTGTGTTGAACTTGGATTGTGACCAATACATCAACAATAGCAAGACTATAAGGGAGGCTATGTGCTTCTTGATGGATCCTCAACTTGGAAAGAGGATTTGTTTTGTCCAATTTCCAAGAAGGTTCGATGGCATCGATAGCAATGATCGATATGCTAATCGCAATACCGTGTTCTATGATATCATGATGAAGGGCCTTGATGGGATTCAAGGTCCAGTGTATGTTGGTACGGGTTGTGTTTTCAATAGGCAGGCAATATACGGAAATAAACCGCCATCCGATAAAAAGCCAAAGACAAGCCGGTCTTCGTTCTGCTGCTGCTGCTGTTGCTGTTCTGGTGATGATTCTGAGTCCACATTTGATCTTGAAGAGATGGATGAAGGACTTGAAGGGTTTGAAGAGAAAGAGGAAACATCATTCATTTCAATGAAAAAATTTGAGAAGCAATACGGAATGTCACCAGTTTTGATTGCTTCTGTTTTGATGGAAGATGGTGGACTTCCAAAAGTGACCAACACACAGTTGCTTATTAAGGAAGCAATTCATGTTATTAGTTGTGGTTATGAAGACAAAACTGAATGGGGCAAAGAGATTGGGTGGCTTTATGGTTCAGTGACAGAAGATATCTTAACAGGATTTAACATGCATTGTAGAGGGTGGAAATCAGTGTACTGCATGCCAAAGAGAGATGCTTTTAAGGGATCTGCTCCTATAAATCTATGTGATAGATTACACCAAGTTCTGAAATGGGCTCTTGGTTCAACTGAGATCTTCTTTAGTGGCTATTGCCCATTGTGGTATGGCTATACTGGTAAACTAAAATTGCTGCAGAGATTAGCTTACACTAATAATATTGTTTATCCTTTCACTTCCATCCCTCTCTTGGTGTACTGCACGATTCCGGCCGTCTGTCTTTTGACCGGAAAGTTCATCGTCCCTGCATTGACAAATGTTGCTAGCATTTGGTTAATGGCTCTATTCACCTCCATGATCTTAACGTGCGTGCTAGAGCTCCGGTGGAGTGGGGTAAACATTCAGGACTGGTGGCGCAACGAGCAATTCTGGGTCATCGGGGGCGTCTCCTCGCACCTCTTTGCCGTGTTCCAAGGTCTCCTCAAAGTTGGTGGAGTACACTCTAACTTCACAATCAGAACAAAATCCACAGATATTAACAGTGTATCAAATCAACTCTATCTTTTCAAGTGGACAACTCTTATGATACCACCAACAAGTCTTGTGATCTTGAACATGGTTGGGATTGTGGCTGGAATATCTGATGCCATTAACAGTGGATATAACTCATGGGGACCTTTGTTTGGGAAGATTTTCTTTTCTTTTTGGGTCATTGTTCATCTGTATCCTTTCCTTAAAGGTCTAATGGGAAGGCAGAACAGGACACCTACCATTGTTGTTCTCTGGTCAATACTTTTAGCATTGGTTTTCTCAATGATTTGGGTGAGAATTGATGTATTCTTGCCCAAGAAAACAGGTCCAGTTCTAAAACAATGTGGGGTAGAATGTTAA 2697 0.4275 MAASGSAATGSHSRKGLGFMHFDDSDEENEAFNQQQWQHNVEAFSLAGSVATKDSEIEFGFLSNTEKHKERKEKKGLISNDQEDEDYILAEARQPLWRKVPVPSSLINPYRIVIVMRLVVLAFFFRFRILNPVHDAYPLWLISVICEIWLALSWLVDQLPKWFPITRETSLERLSLRFEREGEQNKLAPVDVFVTTADPFKEPPIITANTVLSVLSVDYPVEKVNCYVSDDSASMLLYDTLYETSEFARIWIPFVNKYSIEPRAPEFYFSQKVDYLKDKVHPTFVRDRRAMKREYEEFKVRINVLISKAQKKPEEGWVMKDGTPWPGNNTEDHPGMIQVCLGSAGALDKDGKQLPRLVYVSREKRPGYQHHKKAGAMNALVRVSAVLSNAPFVLNLDCDQYINNSKTIREAMCFLMDPQLGKRICFVQFPRRFDGIDSNDRYANRNTVFYDIMMKGLDGIQGPVYVGTGCVFNRQAIYGNKPPSDKKPKTSRSSFCCCCCCCSGDDSESTFDLEEMDEGLEGFEEKEETSFISMKKFEKQYGMSPVLIASVLMEDGGLPKVTNTQLLIKEAIHVISCGYEDKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKRDAFKGSAPINLCDRLHQVLKWALGSTEIFFSGYCPLWYGYTGKLKLLQRLAYTNNIVYPFTSIPLLVYCTIPAVCLLTGKFIVPALTNVASIWLMALFTSMILTCVLELRWSGVNIQDWWRNEQFWVIGGVSSHLFAVFQGLLKVGGVHSNFTIRTKSTDINSVSNQLYLFKWTTLMIPPTSLVILNMVGIVAGISDAINSGYNSWGPLFGKIFFSFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLALVFSMIWVRIDVFLPKKTGPVLKQCGVEC 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241825g00011 898 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 93 863 - -
Stsc241825g00011 898 FunFam Cellulose synthase 307 481 - -
Stsc241825g00011 898 Pfam Cellulose synthase 190 891 IPR005150 GO:0016020|GO:0016760|GO:0030244
Stsc241825g00011 898 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 311 480 IPR029044 -
Stsc241825g00011 898 SUPERFAMILY Nucleotide-diphospho-sugar transferases 202 701 IPR029044 -
Stsc241825g00011 898 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241825g00011 Stsc-Chr241825 68453 73318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241825g00011 81 898 Cell Wall Biosynthesis AT5G17420 68.491 0.0 1219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241825g00011 K10999 - gmx:100777278 1455.27