Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241824g00010 ATGGATGCACTTCACAAAGCTGCCAATGCTGCCCTTTCAAGTTGCCCTGTAAACTGTCCGCTGGCTCACATGGAAAGAATTGTGTCTGAGGTGCTGAGGAAAATGGTGAGGAAGTACAGTGGAAAGCGGCCTGAAGTTATTGTCATTGCTGTAGAAAATCCTGCAGCTGTTATTGCTGATGAGGTAAAGACAAAGTTGTCTGGCAAAGCTCATGTGGATGGGATATCAACATGGAGGAGAGTGTTGGATGGGCATGGGAAGGAAAATAACTCCACCAAAACGCGAATTAGAGAGGATCAAGATGAATTATGGAAGTCATTCATCGATTCCTCACCAGCTGAGAAGTCAATCAAAGCTAACAATGGTTATGTCCCTCAAAAGGAGAATAAGCCCCAACTGAAGAAAGATAGTTCTGAAGACTCTGAAGAGGAAATGTCTGAAAAGACATCAAATTCACAATCCAAATATTCAAAATCTTCAAAGAGAAATAAATGGAAACCTGCGGAAATTAAGAAGCTGATTGATATGCGGGGTAAACTACATGACCGATTCAAAGTAGTGAAGGGGAGGATGGCCCTTTGGGAAGAAGTATCTCAGAACTTGTTGGAAAATGGGATCAGCAGAAGTTCTGGGCAGTGCAAATCTCTATGGACATCGTTGTTACAGAAATATGAGGAGGTCAAGAATGAGAAGAATACCAAGAAAAAGTGGCCATATCTTGAGGACATGGAGAGGATTCTATCTGAAAATGAGGAACTGGCAACAAAATGA 771 0.4202 MDALHKAANAALSSCPVNCPLAHMERIVSEVLRKMVRKYSGKRPEVIVIAVENPAAVIADEVKTKLSGKAHVDGISTWRRVLDGHGKENNSTKTRIREDQDELWKSFIDSSPAEKSIKANNGYVPQKENKPQLKKDSSEDSEEEMSEKTSNSQSKYSKSSKRNKWKPAEIKKLIDMRGKLHDRFKVVKGRMALWEEVSQNLLENGISRSSGQCKSLWTSLLQKYEEVKNEKNTKKKWPYLEDMERILSENEELATK 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241824g00010 256 PANTHER RIBONUCLEASE J 97 256 - -
Stsc241824g00010 256 ProSiteProfiles Myb-like domain profile. 157 221 IPR001005 -
Stsc241824g00010 256 Gene3D - 165 226 - -
Stsc241824g00010 256 CDD GT1 165 228 - -
Stsc241824g00010 256 MobiDBLite consensus disorder prediction 129 149 - -
Stsc241824g00010 256 Pfam Myb/SANT-like DNA-binding domain 162 246 IPR044822 -
Stsc241824g00010 256 MobiDBLite consensus disorder prediction 115 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241824g00010 Stsc-Chr241824 66441 68630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241824g00010 164 248 Trihelix Transcription Factor Family AT2G38250 29.885 1.40e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc241824g00010 Myb_DNA-bind_4 1.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241824g00010 - - gmx:100814619 348.206