Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241822g00011 ATGAAAGTGGCATCGCTCGCCAATATGTCCAGCTTGCATTCATGGCTTGGCATTGGAGTTATTTCCCTTTATGGGATTCAGTGGATATTTGGGTTTGTGATGTTTTTCTTTCCCGGAGGGAGTGCATCACTGAGAAGTCAATCAATCCCATGGCACGTGCTGTTTGGGCTGATAGTGTATGTACTGGCACTTGGAACAGCTTCTCTTGGGTTCCTAGAGAAGCTCACATTCCTGGAGAGTTCAGCAGGTGTAGCTAAATATGGTTCAGAGGCATTCCTTGTTAACTTAACAGCCATTTTCACAATCTTGTTTGGTGCCTTTGTCGTCTTGTCTTCTATTTCTTCTGCTCCAGGTGATGATGACTATTCACCCATATAA 378 0.4418 MKVASLANMSSLHSWLGIGVISLYGIQWIFGFVMFFFPGGSASLRSQSIPWHVLFGLIVYVLALGTASLGFLEKLTFLESSAGVAKYGSEAFLVNLTAIFTILFGAFVVLSSISSAPGDDDYSPI 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241822g00011 125 PANTHER CYTOCHROME B561-RELATED 5 113 IPR043205 GO:0016491
Stsc241822g00011 125 ProSiteProfiles Cytochrome b561 domain profile. 1 113 IPR006593 -
Stsc241822g00011 125 SMART 561_7 3 71 IPR006593 -
Stsc241822g00011 125 Gene3D - 2 122 - -
Stsc241822g00011 125 Pfam Eukaryotic cytochrome b561 5 77 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241822g00011 Stsc-Chr241822 76566 77450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241822g00011 4 112 Chloroplast and Mitochondria Gene Families AT4G25570 66.055 8.98e-48 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241822g00011 K08360 - qsa:O6P43_004312 197.208