Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241818g00008 ATGACTGAGTCTACTTCAACTCCATCTACTTCTAACAACGCCAATTTATCTTCTTTCCAACCAACGGTTTCTTTATATGAGTGGTGGCTGGTTAAAGCTGAACATGACTTTGATGGAAAGCGGTTAGCCATCGGAGGCATTGCTTCAAGAAAGGAAGAAGCAGTGCGTGTCTTCATCACTGCGCCGATTACCAAACGGCATGATCTGTTCTCTCTGGAGACCGCAGATGGGATTTATATCATCATAAGGGGTTTCATTAATGAGAAGCGCACCGTCGATAATGGTTTCCCTCCCGAGGTTACCAACCATTTCTTATTTGGTTTCCCTGATAACTGGGAAAAGTATGCTGCAGATTTGTTTAGGAATGAATCAACTATTGGCACTGATTTGGGTAGTGCTGTTCCTGAAAATGTATCAGAAATTGAGCCTGAGATCTGTTCTGATGGTCTTGAGAAATCTATCCCGTCTTCTTTGAAACCCTTGAAAGAAGCATCTGGAGCTCATGGGAAGCCACATCCTGAAGTTGAATGCCATGATTCTGGCACTACAGGTGAGGTTAATGCTGCTCAAGGCAGTGGCAGCGTTAGACGTAGTAACAGATTGCACAACATAAAAGTCTGTCAGCAGAAGAAGCCTGCCTCTGGGGTTCCTCAGAAGCATCCAGAAGAACTGAACAGTCCAGTGACACCAGTTCCATTACAATCTCTGGAAAAAGAAAATACATCATCTGAGCGGCTCGTTAAAACTTCTACATCTAGAGTTTCTAAAACTTTATTTCAAAATAAAAGAGGCCGTCCTAGGAAAAAGAAAGATACAATTGAAAAAAGTGAGATCACTTGTGAAAGAAAAATGGCGAGATCTGCCACTGCAGTCAAATATCCACGAAATAGGGATGCAAGCCCCTTTAACATTGGTGAGAAAGAGAAGACATCCTCAGTTTCTGCTCTATCAAGTTTCAAAAAGTCCAGATCAGGGAGGTTGCTTCTACCACCCTTAGAGTTTTGGCGTAACCAGATACCGATTTACAATGCGGACCATGAGGTTACAGAAATTCAGGGAGGTGCATCTGTGGTTCACTAG 1080 0.4296 MTESTSTPSTSNNANLSSFQPTVSLYEWWLVKAEHDFDGKRLAIGGIASRKEEAVRVFITAPITKRHDLFSLETADGIYIIIRGFINEKRTVDNGFPPEVTNHFLFGFPDNWEKYAADLFRNESTIGTDLGSAVPENVSEIEPEICSDGLEKSIPSSLKPLKEASGAHGKPHPEVECHDSGTTGEVNAAQGSGSVRRSNRLHNIKVCQQKKPASGVPQKHPEELNSPVTPVPLQSLEKENTSSERLVKTSTSRVSKTLFQNKRGRPRKKKDTIEKSEITCERKMARSATAVKYPRNRDASPFNIGEKEKTSSVSALSSFKKSRSGRLLLPPLEFWRNQIPIYNADHEVTEIQGGASVVH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241818g00008 359 MobiDBLite consensus disorder prediction 160 230 - -
Stsc241818g00008 359 MobiDBLite consensus disorder prediction 183 202 - -
Stsc241818g00008 359 MobiDBLite consensus disorder prediction 165 179 - -
Stsc241818g00008 359 Pfam SANTA (SANT Associated) 23 115 IPR015216 -
Stsc241818g00008 359 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 134 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241818g00008 Stsc-Chr241818 76311 81349 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc241818g00008 SANTA 4.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241818g00008 - - gsj:114370329 375.17