Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241817g00008 ATGATTGGCAACATCTATGAGGTTGGACCCTGGCTTATCACTGAATCTCTCACCCTTCAACCTAATCCTGCTGCTAGAAACAGAATCTTTGGCCTCCTTTTTCTTGACAATCCCATTGGCACCGGATTCAGTGTGGCCTCATCGCCGAACGAAATCCCAACAGATCAAAAGGGTGTTGCCAAGCACCTCTTTGCTTCTATAACAAGGTTGAGTGGTACTCAAAGAGTGAATTTGGCTGGCGTTGTTATTGGGGATGGCGCAACAGAACCAGTTAGACAGGTGGCTACTTCTGCTGATAGTGGCTATTATGTTGGTATGATCAATGAGAAGCAGAAGAGAGAGTTGGAGAAGCTGCAATCGGAAGCAGTTATGTTGGAACGGATTGGGAATTGGAGCGAAGCAACAGATGCAATAAGAAGAGTGTGGAGTAAGTTGCAAGACATGACAGGGTTGCATTCTTTGTTTGATTACACAATGAGAAAAGACTCTTACCACTTTTATGATTGGATCAATCAATTCATGAACAAAGCTGAAGTGAAGAAGGCATTGGGAGTGAACCAATCGCAAGTCTTTGATGTCCACAACAATGATGTTTTTGCAGCAACGAGTAATGATTCGGCAAAGAGTGTGAAGCCCTTGTTAAGGAGTGCTATAAAAGTATTGTTGTACCAAGGTCAATATGATTTACTTGGTGGACCAGTGCAAGTTGAGGCATGGGTGAAGACTTTGAAATGGGAAGGGATTGAGGATTATTTGAATGCAGAGAGGAAGATATGGAAGGTGAATGGAGAGCTTGCTGGTTATGTCCATCAATGGAAGTCACTCACCAATGTTGTGATCTTGGGTGGTGGCCATATTTTGCCTCATGACCTGCCTTTGAATACTCAAGCAATGTTTGAAGATTGGGTCTTGCAAAGGGGTATCTTTGAAAATTCACCTTTTAGTTACATTTAA 954 0.4277 MIGNIYEVGPWLITESLTLQPNPAARNRIFGLLFLDNPIGTGFSVASSPNEIPTDQKGVAKHLFASITRLSGTQRVNLAGVVIGDGATEPVRQVATSADSGYYVGMINEKQKRELEKLQSEAVMLERIGNWSEATDAIRRVWSKLQDMTGLHSLFDYTMRKDSYHFYDWINQFMNKAEVKKALGVNQSQVFDVHNNDVFAATSNDSAKSVKPLLRSAIKVLLYQGQYDLLGGPVQVEAWVKTLKWEGIEDYLNAERKIWKVNGELAGYVHQWKSLTNVVILGGGHILPHDLPLNTQAMFEDWVLQRGIFENSPFSYI 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241817g00008 317 Coils Coil 108 128 - -
Stsc241817g00008 317 Gene3D alpha/beta hydrolase 1 69 IPR029058 -
Stsc241817g00008 317 Gene3D alpha/beta hydrolase 70 312 IPR029058 -
Stsc241817g00008 317 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 290 IPR001563 GO:0004185|GO:0006508
Stsc241817g00008 317 Pfam Serine carboxypeptidase 74 303 IPR001563 GO:0004185|GO:0006508
Stsc241817g00008 317 Pfam Serine carboxypeptidase 1 67 IPR001563 GO:0004185|GO:0006508
Stsc241817g00008 317 SUPERFAMILY alpha/beta-Hydrolases 1 304 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241817g00008 Stsc-Chr241817 44159 45226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241817g00008 175 303 Calmodulin-binding Proteins AT2G22960 24.060 3.45e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241817g00008 K09645 - gmx:100780822 380.948