Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241817g00007 ATGGACCCCACCTACTTCTTCCTTTTCTCCATTCTTATTTCCTTCAGCTTCTTCTTCATCATTCAAACCCATGTCTTAGCTTCTTCTAACTCCAACAATAATCCATTCCCCAAAGAAGCTCACCCCACAAAAACTGGTTACCTCCCGGTGAGTACCACTTCTTCCTCTGCTATGTTCTATGCTTTCTATGAAGCTCAGAACTCAACCTTACCTCTCTCCAAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCAGCTCCTCCATGGTTAGCAACCTCAATGCGGTTGGTCCATGGCGTATCACACAATCCATCACTCTTGAACCTAACCCCGGTGCTTGGAACAAGTTCTCCGGCCTTCTCTTTCTAGATAACCCCATTGGCACTGGATTCAGTGTGGCCTCATCACTTCAAGAAATCCCAACGGATCAAGAAGGTATTGCCAGACACCTTTTTACTGCTATCACAAGGTTTCTTCAACTTGAAGCTATTTTTGAGTATCGCCCTATTTATATCATTGGCCAAAGCTATGGCGGAAAGTTTGCCGCTGCAACTGGATATTATATATTGAAGAAGCATGAAGAGTTTGAAGCATCCCGGAAAGTAAATTTGGTTGGTGTGGTCATTGGGGATGGCTTACCTGAGCCTCTGACCCAATTTGGCACGATACCTACTAATGCTTATTACTTGGGTTTGATCAATGAGAAGCAAAAGAAAGAGCTGGAGAAAGATCTATTGGAGGTAGTTAGGTTGACTCAGATTCAGAATTGGAATAAAGCAGATACTGAATGGACTAGAGTCCAGGGGAAGCTTCTAAACATGTCAGGGTTGGCTACTTTGTATGACTACACAAAGAAAGATCAACCTGCTAACTATCAAGATTTGGTTAATCAATTCTTGAACATGGCTGAGGTGAAGGAGGCACTGGGAGTGAAAGAATCTCTAGTCTTTAAAGCTAGCAGCAGTGATGTAAGGACAGCGTTGCAGGGTGATACAATGAAGAGTGTCAAGTTTGGGGTGGAGGAGTTCTTGAGGAGCAAAGGTGTTAGGGTGTTGTTGTTCCAAGGTCAATATGATTTGGTTGCTGGTCCTGTACAAACTGAGGCATGGGTGAAGAATATGAAATGGGAAGGGATTGAGGAGTATCTGAATGCAGAGAGGAAGATATGGAAGGTGAATGGAGAGCTTGCTGGTTATGTGCAACAATGGAAGTCACTCACTAATGTTGTGGTCTTGGGTGGTAGCCATCTTTTGCCTGCTGACCAACCTTTGAATGCTCAAACAATGATTCAAGATTGGATCTTGCAAAGGGGTATCTTTGGAAATTCACCTTCTTTTGGTTACATTTAA 1353 0.4368 MDPTYFFLFSILISFSFFFIIQTHVLASSNSNNNPFPKEAHPTKTGYLPVSTTSSSAMFYAFYEAQNSTLPLSKTPLLIWLQGGPGSSSMVSNLNAVGPWRITQSITLEPNPGAWNKFSGLLFLDNPIGTGFSVASSLQEIPTDQEGIARHLFTAITRFLQLEAIFEYRPIYIIGQSYGGKFAAATGYYILKKHEEFEASRKVNLVGVVIGDGLPEPLTQFGTIPTNAYYLGLINEKQKKELEKDLLEVVRLTQIQNWNKADTEWTRVQGKLLNMSGLATLYDYTKKDQPANYQDLVNQFLNMAEVKEALGVKESLVFKASSSDVRTALQGDTMKSVKFGVEEFLRSKGVRVLLFQGQYDLVAGPVQTEAWVKNMKWEGIEEYLNAERKIWKVNGELAGYVQQWKSLTNVVVLGGSHLLPADQPLNAQTMIQDWILQRGIFGNSPSFGYI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241817g00007 450 Pfam Serine carboxypeptidase 42 436 IPR001563 GO:0004185|GO:0006508
Stsc241817g00007 450 SUPERFAMILY alpha/beta-Hydrolases 42 436 IPR029058 -
Stsc241817g00007 450 Gene3D alpha/beta hydrolase 19 441 IPR029058 -
Stsc241817g00007 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Stsc241817g00007 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Stsc241817g00007 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Stsc241817g00007 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 407 420 IPR001563 GO:0004185|GO:0006508
Stsc241817g00007 450 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 424 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241817g00007 Stsc-Chr241817 41131 42483 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241817g00007 293 435 Calmodulin-binding Proteins AT2G22960 22.917 1.44e-09 55.5