Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241817g00006 ATGGAAGCAATGTGTCGAATTCACCATGTCAATGTAGCTCGCCTGGTCGGATATTGTTCGGATGGATCTAGAAGAGCTTTGGTATACGAATTTTTACCAAACTGTTCCTTGCAAAAAGTCATTTCCTCAGCAGACACCAAAGATGTCTTTCTAGGCTGGGAAAAGCTACAAGATATTGCTCTCGGCATAGCCAAGGAAATTGAGTATCTTCACAAAGGGTGTGAGAAAAGAATTTTACATTTTGACATCAAGCCTCATAATGTACTGCTAGATAGCAATTTTACACAAAAAAATCTGATTTTGGGTTAG 309 0.3883 MEAMCRIHHVNVARLVGYCSDGSRRALVYEFLPNCSLQKVISSADTKDVFLGWEKLQDIALGIAKEIEYLHKGCEKRILHFDIKPHNVLLDSNFTQKNLILG 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241817g00006 102 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
Stsc241817g00006 102 SUPERFAMILY Protein kinase-like (PK-like) 2 97 IPR011009 -
Stsc241817g00006 102 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 97 IPR045874 GO:0004672
Stsc241817g00006 102 ProSiteProfiles Protein kinase domain profile. 1 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241817g00006 102 Gene3D Transferase(Phosphotransferase) domain 1 1 99 - -
Stsc241817g00006 102 Pfam Protein kinase domain 2 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241817g00006 Stsc-Chr241817 35789 36097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241817g00006 1 97 Receptor kinase-like Gene Family AT1G66910 51.546 5.62e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc241817g00006 Pkinase 1.9e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241817g00006 - - tpra:123914140 169.088