Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241815g00015 ATGAAGAGGGATCACAGTGAAGCTGGCTCCAGCTACGGCCAGCAAGGTAGCAGCAGCAGCAGCGTGGCCAAAGGCGAATGTTCGTCAATGTCGAGTGGCAAGGCCAAGATGTGGGAGGAAGATCACGACCCAAGCTCCGGCGGCGGCATGGACGAGCTCCTCGCTGCTCTTGGTTACAAGGTTCGCTCCTCAGACATGGCAGACGTGGCCCAGAAGCTGGAACAGCTGGAGATGGTTATGGGTACCGCCCAAGAAGATGGAATTTCCCATCTCGCTACTGACACCGTTCACTACGACCCTACGGATCTCTACTCCTGGGTGCAGAGCATGATCAATGAGCTCAACCCTCCCCCAACCACCGCCGGGAACGGAACAAGCACCCCACTTCTGTGCAGCTCTCAAATCGAGGAGAACCCTTCACGTGCGTTCACGGACGACTCAGAGTATGATCTGAGAGCCATCCCTGGCGTCGCCGTTTACCCTCAAAACGACGAGCCCAGCAACAAACGGCTAAAAACGTACCCTGTTGCGGAAATCGGGTCGGAGGGCGTTGAAGAACCGACCCGGCCAGTTGTCCTGGTGGATTCCCAAGAAACAGGTGTCCGTCTAGTCCACAGTCTCTTAGCCTGCGCGGAGGCAGTTCAGCAAGAAAACCTAAAGCTGGCAGACGCGCTTGTGAAGCACGTGGGGGTACTCGCGGCGTCGCAGGCGGGTGCCATGGGCAAAGTTGCATCCTACTTCGCACAGGCACTTGCGAGGAGGATTTACCAGATTTACCCCCAAGAACCCATGGAGTCTTCTTTCTCAGATGTTCTCCACATGCACTTCTACGAGGCCTGCCCTTACCTCAAATTCGCGCACTTCACAGCCAACCAGGCCATACTCGAGGCCTTCGCCTCTGCCACCACAGTCCACGTCATCGATTTCGGCCTCAAGCAAGGGATGCAGTGGCCCGCGCTCCTCCAGGCCCTCACATTGCGCCCCGGCGGCCCACCCACTTTCCGTTTGACTGGAATAGGCCCCCCTCAGCCCGACAACACCGATGCCCTCCAGCAAGTTGGATGGAAGCTCGCACAGCTCGCACAAACCATAGGCGTTCAATTCGAGTTTCGCGGCTTCGTCTGTTCCAGCCTCTCGGATCTCGACCCGGACATGCTCCAGATCCGACCCGGAGAAGCCGTTGCGGTTAACTCCGTTTTCGAGTTGCATCGCATGCTCGCCCGCCCCGCCTCCATCGAGAAAGTTCTCGGCACGGTCAACAAGATCAAGCCCAGGATCTTCACGGTGGTGGAGCAGGAGGCCAACCATAACGGTCCGGTTTTTGTGGACCGGTTCACGGAGGCCTTGCATTATTACTCGAGCTTGTTTGACTCGCTGGAGGGATCGGCGTCGACGGGGATAGGGGCAGCGCCGCCGAGTGAGGACCTGTTGATGTCGGAGTTGTACCTTGGGAGGCAAATTTGCAACGTGGTGGCGTGCGAGGGCACAGAGCGCGTGGAGCGTCACGAGACGCTGACGCAGTGGCGGGCCAGGATGGGATCGGCCGGGTTCGAGCCGGTCCACCTGGGGTCGAACGCTTTCAAGCAGGCGAGCATGTTGCTGGCGCTGTTCGCGGGTGGGGATGGTTACAGGGTGGAGGAGAACAATGGTTGCCTTATGCTTGGGTGGCACACCAGGTCCCTGATTGCGACCTCCGCCTGGAAGCTTCCACCCCTTTCTTCTGGCGGCGAGTCTTAG 1737 0.5889 MKRDHSEAGSSYGQQGSSSSSVAKGECSSMSSGKAKMWEEDHDPSSGGGMDELLAALGYKVRSSDMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYDPTDLYSWVQSMINELNPPPTTAGNGTSTPLLCSSQIEENPSRAFTDDSEYDLRAIPGVAVYPQNDEPSNKRLKTYPVAEIGSEGVEEPTRPVVLVDSQETGVRLVHSLLACAEAVQQENLKLADALVKHVGVLAASQAGAMGKVASYFAQALARRIYQIYPQEPMESSFSDVLHMHFYEACPYLKFAHFTANQAILEAFASATTVHVIDFGLKQGMQWPALLQALTLRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAQTIGVQFEFRGFVCSSLSDLDPDMLQIRPGEAVAVNSVFELHRMLARPASIEKVLGTVNKIKPRIFTVVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSASTGIGAAPPSEDLLMSELYLGRQICNVVACEGTERVERHETLTQWRARMGSAGFEPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRSLIATSAWKLPPLSSGGES 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241815g00015 578 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 139 564 IPR005202 -
Stsc241815g00015 578 Pfam Transcriptional regulator DELLA protein N terminal 51 118 IPR021914 -
Stsc241815g00015 578 ProSiteProfiles GRAS family profile. 194 568 IPR005202 -
Stsc241815g00015 578 FunFam DELLA protein GAI 49 114 - -
Stsc241815g00015 578 SMART DELLA_2 51 124 - -
Stsc241815g00015 578 MobiDBLite consensus disorder prediction 1 49 - -
Stsc241815g00015 578 Coils Coil 66 86 - -
Stsc241815g00015 578 MobiDBLite consensus disorder prediction 8 28 - -
Stsc241815g00015 578 Gene3D - 49 114 IPR038088 -
Stsc241815g00015 578 Pfam GRAS domain family 203 568 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241815g00015 Stsc-Chr241815 79253 80989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241815g00015 1 569 GRAS Transcription Factor Family AT2G01570 60.927 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc241815g00015 GRAS 3.1e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241815g00015 K14494 - gmx:547719 859.751