Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241813g00008 ATGAATACGACGCCGTTTATGGACAAGCAGATTATGGATCTCACCCACTCAGGATCTTCACAGAGCAAGGACCTCATCGACCTCATCAACAACAACAACAACAACAACAACCATAATCACAAACACAAAGCCACTGATGAAGAAGATGAACGCGATGAACATCATGAAACCCTAAATAGTAATAATAATAATAATCTCAATGGGATTGGGGTTACCAAAGATGACATCGTTCCCAGCTACGATTTCCAACCCATTCGCCCCCTCGCCGCTTCTTCTTCTCCTAATTACGATTCTGCCCCCAATTTAGCTGCTGCTGCTGCTAGTTCTTTCTCAACTAGATCATGGAACTCCGATTCCAATGCCAACACTTCCCCTCCGCGCCCTCTCATCAAAAGTTACAGTTCTCTGGATACTATTGAACCTACAAAGGTTGCTGCTGTAGGAAAGGACCAAAAGGCTTCTGATGCAACAATTCTGTCTGAAATTGATCAAACAATGAAGAAACATATGGAAAATCTGCTTCATGTTATGGAAGGTGTTAGTGCGCGGTTAACACAGCTAGAAAGCCGAACCCACCGACTTGAGAATTCTGTGGATGATTTGAAGGTATATGTTGGAAACAATCATGGAAGCACTGATGGAAAACTAAGGCAACTGGAGAATATTCTTCGAGAGGTTCAAACAGGGGTGCAAACCATCAAGGATAAGCAAGATATATTGGAAGCTCAGCTGCAGCTGGCTAAGCTGCAAGTGTCGAAGATGGATCAGCAGTCAGAAACTCAAACCAGTATGGTTACAAATCCTGTCCAGCAAGATGCATCTGCACCCCAGCAATCTCAGCCACAGCTTCCTCATCCGGCTAATCTCCCACAATCAATTCCTGCAGTTCCTTCACCTAATGCGCCTCCTCAACCTCCCCCTCAACAGGGATTGCCACCTCCAATTCAACTCACAAATCAATTCCCTCAGAACCAAATCCCAGCTGGTCCTCAGAGAGATTCGTACTTCGCTCCACCACCACCTGTTCAACCACAGGAGGCCCCAAATCAGCAATACCAAGTGCCTCCAACTCAGCAGCCACATCCTCAGGCAGGGGCGCCTCCACATCAGCAGTATCAACAGCCCCCTCATTCCCAGTTCCCTCAGCCAGCACCTCATCTACCTCAACAGCAGCCAGCACCTCATTTACTTCAACAGCAGCCATCAATTTCACCCGTAAATCTGCCGCAAGTTCAATCTTCACTTGGCCAGCATGTCGAGGAAACACCTTATGTTCCTTCTCAAAACTATCCTCCCAATCTCCGCCAGCCAACATCTCAGCCACCTGGTGGGCCTCCTCCTACCCAACAGTACTATGGCGCACCAACCCATGCGTATGAACCACCATCGAGTAGACCTAATCCAGGCTATTCTTCTGGATATGGTACGTTATCAGCTCCTGCTGAGCCATACCGTTATGGTGGATCATCACAATATGGTGGCACGTCTGCACTTAAGGCACAACAACTGCCTACTGCTTCATCAGTGGCTCCAAGCGGTGGAAGTGGCTACCCTCAACTCCCGACTGCTCATGTACTCCCTCAGGCATTACCAACTGCATCTGTAGCAGGTGGGGGTTCGGGTTCTCCCGGAGGTGGGAATAGGGTTCCCATCGATGATGTAGTCGACAAAGTTGCTAGTATGGGATTCCCTAGGGACCACGTAAGGGCAACAGTTCGGAAGCTGACAGAGAATGGCCAATCAGTTGACCTGAATGCAGTGCTGGACAAGCTTATGAATGATGGTGAACTGCAAACAAGAGGTTGGTTCAACCGGTAG 1818 0.4829 MNTTPFMDKQIMDLTHSGSSQSKDLIDLINNNNNNNNHNHKHKATDEEDERDEHHETLNSNNNNNLNGIGVTKDDIVPSYDFQPIRPLAASSSPNYDSAPNLAAAAASSFSTRSWNSDSNANTSPPRPLIKSYSSLDTIEPTKVAAVGKDQKASDATILSEIDQTMKKHMENLLHVMEGVSARLTQLESRTHRLENSVDDLKVYVGNNHGSTDGKLRQLENILREVQTGVQTIKDKQDILEAQLQLAKLQVSKMDQQSETQTSMVTNPVQQDASAPQQSQPQLPHPANLPQSIPAVPSPNAPPQPPPQQGLPPPIQLTNQFPQNQIPAGPQRDSYFAPPPPVQPQEAPNQQYQVPPTQQPHPQAGAPPHQQYQQPPHSQFPQPAPHLPQQQPAPHLLQQQPSISPVNLPQVQSSLGQHVEETPYVPSQNYPPNLRQPTSQPPGGPPPTQQYYGAPTHAYEPPSSRPNPGYSSGYGTLSAPAEPYRYGGSSQYGGTSALKAQQLPTASSVAPSGGSGYPQLPTAHVLPQALPTASVAGGGSGSPGGGNRVPIDDVVDKVASMGFPRDHVRATVRKLTENGQSVDLNAVLDKLMNDGELQTRGWFNR 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241813g00008 605 Coils Coil 170 190 - -
Stsc241813g00008 605 MobiDBLite consensus disorder prediction 435 449 - -
Stsc241813g00008 605 MobiDBLite consensus disorder prediction 503 522 - -
Stsc241813g00008 605 Gene3D - 160 262 - -
Stsc241813g00008 605 Pfam UBA-like domain (DUF1421) 551 595 IPR010820 -
Stsc241813g00008 605 MobiDBLite consensus disorder prediction 257 286 - -
Stsc241813g00008 605 MobiDBLite consensus disorder prediction 16 38 - -
Stsc241813g00008 605 MobiDBLite consensus disorder prediction 347 377 - -
Stsc241813g00008 605 MobiDBLite consensus disorder prediction 39 58 - -
Stsc241813g00008 605 MobiDBLite consensus disorder prediction 16 72 - -
Stsc241813g00008 605 MobiDBLite consensus disorder prediction 257 476 - -
Stsc241813g00008 605 MobiDBLite consensus disorder prediction 112 134 - -
Stsc241813g00008 605 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 603 - -
Stsc241813g00008 605 MobiDBLite consensus disorder prediction 392 434 - -
Stsc241813g00008 605 MobiDBLite consensus disorder prediction 287 313 - -
Stsc241813g00008 605 Coils Coil 216 250 - -
Stsc241813g00008 605 MobiDBLite consensus disorder prediction 314 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241813g00008 Stsc-Chr241813 43804 46951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241813g00008 10 336 Trihelix Transcription Factor Family AT5G14540 44.345 1.97e-66 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241813g00008 - - adu:107490056 910.212