Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241808g00009 ATGTTGGACATTCCCAAGGAATGTGAGAATGGGAAACTTGAAGTGATATTCAGCAGTAAGACTGTTGTAAAAGCTTCCAATCCTTTTCCAAAGCCTTTTTCAATCACACTCTCAAATCTTGACCTACTTTCAGGCCGTTTTCCAGTTACATACTTGTATTTCTACCGCAGGCCACAGGTAGATAGCTTCAGAGCTTTTGTTGAGGCTCTCAAGACCTCTCTAGCACAAGTACTTAATTACTACTACCCTTTTGCTGGCCAAATTGCTGAAAATCCCAAAACCAGTGAGCCGGAAATCATTTGTGACAACAATGGTGCTCTATTCATCGAGGCACACATCAATGTTCCATTAAAGAGAATAGATTTCTATAATCTCAACGAAACCCTCGGAGGAAAGATAGTCTCTGTTCAACCAGACTTCCCCTTGCAAGTTCAGGTAACAGACTACACTTGTGGAGGCATTTCCATAGCATTTACCTTTGACCATGCATTAGGGGATGCAAGTTCCTTTGGTAAATTTATTGCCTCCTGGTGTGAAATATCCCAAAATAAACCACTAACCTGTCTTCCGGACCACACTAGATCCCTTCATGCACGTTCTCCCCCAAGATATCACCCATCCTTGGACCAAACTTTTATCAAATGCACCAAAGAAGACATACAGAACATATCAATGAACCACATCTCGCTTAAACGACTTTACCATATCAACGCATCAAGTATTAACATGCTGCAGAGACTTGCATCTATTAATGGCACAAAGAGAACAAAGATTGAGGCTTTCTCTGCCTATGTATGGAAGAAAATGATCGGTACCATTGATCAAAGCCATAAGAAGTGTAAGATGGGTTGGTTGGTCGACGGCAGAGAGAGAATGAGTAGGGGTGGGAATTCCATGTCAAATTACATTGGCAATGTCCTATCTTTGGCTTTTGGGGAGGCAAGTATTCAGGAATTGAAGGAAGCCTCTATATCAGATATTGCTAACATGGTAAATGAGGCAATTTCAGAGGTTACCAATGAGGTTCATTTCTTGGACTTGATTGATTGGATAGAGTGTCACAGGCCGGGTCTGATGATAGCAAAAGCAGTCTTGGGTCAGGAAGGGCCAACCTTGGTCGTGTCCTCAGGAAGAAGGTTTCCAATCACTGAAATTAACTTTGGATTCGGGACTCCCTTGATAGGGACAGTATACACTTCCATTGAAAAGATTGGAGTCGGTTACATGAATCAAAGGCAAAGTGCCAAGGGTGATGGCTCTTGGACTGTGTCTGCTATCTTGTGGCCGGAACTTGCAGCTGCACTGGAGAGTGACCCAATTTTCAAGCCTATGTCTGCTGCTCATCTTCAACTTTAG 1356 0.4277 MLDIPKECENGKLEVIFSSKTVVKASNPFPKPFSITLSNLDLLSGRFPVTYLYFYRRPQVDSFRAFVEALKTSLAQVLNYYYPFAGQIAENPKTSEPEIICDNNGALFIEAHINVPLKRIDFYNLNETLGGKIVSVQPDFPLQVQVTDYTCGGISIAFTFDHALGDASSFGKFIASWCEISQNKPLTCLPDHTRSLHARSPPRYHPSLDQTFIKCTKEDIQNISMNHISLKRLYHINASSINMLQRLASINGTKRTKIEAFSAYVWKKMIGTIDQSHKKCKMGWLVDGRERMSRGGNSMSNYIGNVLSLAFGEASIQELKEASISDIANMVNEAISEVTNEVHFLDLIDWIECHRPGLMIAKAVLGQEGPTLVVSSGRRFPITEINFGFGTPLIGTVYTSIEKIGVGYMNQRQSAKGDGSWTVSAILWPELAAALESDPIFKPMSAAHLQL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241808g00009 451 Gene3D - 216 437 IPR023213 -
Stsc241808g00009 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 30 400 - -
Stsc241808g00009 451 Pfam Transferase family 14 438 - -
Stsc241808g00009 451 Gene3D - 10 210 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241808g00009 Stsc-Chr241808 51475 53236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241808g00009 38 394 Monolignol Biosynthesis Gene Families AT5G48930 25.594 2.46e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241808g00009 - - gmx:100795616 734.561