Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241808g00006 ATGATGGATTGCACAAAATGGTTATGCCTTCTATTTTGTGTACTGCTATTTCTGAAGGCAGAATCTTCTTATGTTCCAATCACTTTTGTCCAGAATGCTGTCACAAAAGGAGCTGTTTGTTTGGATGGGAGTGCACCAGCTTACCATCTAGATAGGGGATTTGGAGAAGGGATAAACAATTGGTTAGTTCAGTTTGAGGGAGGGGGATGGTGCAACAATGTTACTACTTGCTTTTCTCGAAAGAATGGTCGTTTAGGTTCATCTAAGAAAATGGCCAAGAAAATTGCCTTTTCAGGGATTTTAAATAACAGGAGAATTTTTAATCCTGATTTCTACAATTGGAACAGAGTCAAGGTTAGGTACTGTGATGGTTCTTCATTTACTGGTGATAAGGAAGAAGTTAATCCAACAACTCAATTGCACTTCAGAGGGGCAAGGGTTTTTGCTGCTGTCATGCAGGATTTACTTACAAAAGGAATGAAAAATGCTCGAAATGCTATTATATCTGGATGTTCAGCTGGAGGATTGACTTCGATATTGCATTGTGATCACTTCCGAGCTCTATTGCCTGCTGGAGCTAAAGTTAAATGCCTTTCAGATGCCGGTTACTTTATCAACACACGGGATGTCTCTGGAACACAACACATTGAACAATTCTTCAGTCAAATTGTTGCAACACATGGCTCTGCGAAGAATTTGCCTCCGTCCTGCACTTCAAGACTTAGTCCAGGGCTGTGCTTCTTCCCACAGTATTTGGTCTCCCAAATCAGAACACCAATCTTCTTTGTTAATGCAGCATATGACTCATGGCAGATTAAGAACATTCTGGCACCAGGAGTTGCTGATCCTGAAGGCCATTGGCATAGCTGCAAACTTGATATAAACAACTGTTCACCTGATCAACTTGAATTGATGCAAGGGTTTAGGGCACAGTTCCTAAGGGCACTAACTGTGCTAGGCAACTCTCCATCCAAAGGAATGTTCATAGACTCGTGCTATGCCCATTGCCAAACAGAAATGCAGGAAACATGGTTCAGAACTGATTCTCCCCTGTTGAACAAGACAACAATTGCAAAGGCTGTAGGAGATTGGTTCTTTGAACGAAAGACTTTCCGGCAGATTGATTGCCCTTACCCCTGCAATCCCAGCTGCCACAACCGTGTCTTCGAACCAGAAGACCAACCAGAAGTATAG 1194 0.4238 MMDCTKWLCLLFCVLLFLKAESSYVPITFVQNAVTKGAVCLDGSAPAYHLDRGFGEGINNWLVQFEGGGWCNNVTTCFSRKNGRLGSSKKMAKKIAFSGILNNRRIFNPDFYNWNRVKVRYCDGSSFTGDKEEVNPTTQLHFRGARVFAAVMQDLLTKGMKNARNAIISGCSAGGLTSILHCDHFRALLPAGAKVKCLSDAGYFINTRDVSGTQHIEQFFSQIVATHGSAKNLPPSCTSRLSPGLCFFPQYLVSQIRTPIFFVNAAYDSWQIKNILAPGVADPEGHWHSCKLDINNCSPDQLELMQGFRAQFLRALTVLGNSPSKGMFIDSCYAHCQTEMQETWFRTDSPLLNKTTIAKAVGDWFFERKTFRQIDCPYPCNPSCHNRVFEPEDQPEV 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241808g00006 397 SUPERFAMILY alpha/beta-Hydrolases 137 270 IPR029058 -
Stsc241808g00006 397 PANTHER NOTUM-RELATED 13 386 IPR004963 GO:0016787
Stsc241808g00006 397 Pfam Pectinacetylesterase 19 370 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241808g00006 Stsc-Chr241808 29673 33939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241808g00006 1 397 Carbohydrate Esterase AT4G19420 62.731 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241808g00006 K19882 - gmx:100776478 699.123