Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241807g00010 ATGACAAAGAGTGAAGTAAAGCTGTTGGGGACATGGCTTAGTCCATTCGTTATGAGGGCTCGGATCTCTCTTAACATCAAATCAGTGAGCTATGAGTTCCTCGAGGAGACATTTCAGCCTAAGAGTCAACTCCTTCTTCATTCCAACCCTATTTACAAGAAAGTCCCTGTTCTCATTCATCAAGACAAACCTATTTGTGAGTCCTTGATCATTGTGCAGTATGTGGACGATGTCTGGTCCTCTGGCCCATCCATTCTCCCTTCTGAGCCTTACGACCGTGCCATTGCACGCTTCTGGGCTACCTATCTCGATGACAAGTGGTACCCATCCTTGAAATCCATTATAGGAGCAAAAGGAGAGGATGAGAGGAAGAAATTGATAATTGAGGTTGAAGAAGGGCTGGCGTTGCTCGAGGATGCGTTTAACAAGACAAGCAAAGGCAAGGACTTCTTTGGTGGTGACGAAATCGGTTACTTGGACATTGCATTTGGGTGCTTCTTGGGATGGCTTAGGGGGACAGAGTCACTCATTGGGGTGAAGTTGCTTGATCAAGTTAAATCACCTTGTTTGGTGAAATGGGCTGAGAGGTTCTGTGCATGTGGTGCTGTCAAAGATGTTATGCCACAAACAGAGAAGCTTGTTGAGTTTGCTAACATGTTAATGGCTAAAATGGCTTCTTCTACTCCAAAATAA 693 0.4488 MTKSEVKLLGTWLSPFVMRARISLNIKSVSYEFLEETFQPKSQLLLHSNPIYKKVPVLIHQDKPICESLIIVQYVDDVWSSGPSILPSEPYDRAIARFWATYLDDKWYPSLKSIIGAKGEDERKKLIIEVEEGLALLEDAFNKTSKGKDFFGGDEIGYLDIAFGCFLGWLRGTESLIGVKLLDQVKSPCLVKWAERFCACGAVKDVMPQTEKLVEFANMLMAKMASSTPK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241807g00010 230 FunFam Glutathione S-transferase GSTU6 1 86 - -
Stsc241807g00010 230 CDD GST_C_Tau 90 218 IPR045074 GO:0004364|GO:0006749
Stsc241807g00010 230 Gene3D Glutaredoxin 1 85 - -
Stsc241807g00010 230 SUPERFAMILY GST C-terminal domain-like 77 223 IPR036282 -
Stsc241807g00010 230 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Stsc241807g00010 230 SUPERFAMILY Thioredoxin-like 6 109 IPR036249 -
Stsc241807g00010 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Stsc241807g00010 230 Pfam Glutathione S-transferase, C-terminal domain 98 199 IPR004046 -
Stsc241807g00010 230 SFLD Main (cytGST) 2 227 - -
Stsc241807g00010 230 CDD GST_N_Tau 6 79 - -
Stsc241807g00010 230 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 215 IPR045073 -
Stsc241807g00010 230 Gene3D - 86 230 - -
Stsc241807g00010 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 216 IPR010987 -
Stsc241807g00010 230 SFLD Main.3: Omega- and Tau-like 2 227 IPR045073 -
Stsc241807g00010 230 FunFam Glutathione S-transferase U9 86 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241807g00010 Stsc-Chr241807 50408 51506 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241807g00010 1 223 Glutathione S-transferase Gene Family AT1G10370 62.500 7.25e-103 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241807g00010 K00799 - adu:110272419 422.55