Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241807g00002 ATGATGATGGAAACAAAAAATGATGCTTCTGATGAAGATGATGAAGCCAATAGCTCTTTTACTCATGCTGTCATCAACATGGTGGGGATGCTCATAGGTTTGGGGCAATTATCAACTCCATATGCTGTGGAACAAGGTGGCTGGGCATATTCCTCAACCTTACTCATAGGCCTTGGAGTCATGTGTACTTACACTTCACATATCCTCGGCAAATGCCTTCGCAGTTACCCAACAAAGCTAAGAAGCTACGCCGACATCGGCGGCCAAGCATTCGGCTCAAAAGGAAGGATACTAGTCTCAACATTCATATACATGGAGATCTTCATGGCTCTTATCTCCTACACTATCTCCCTACATGACAACATAGTAACCGTCTTCTTAGGAACCACTTTGAAGCTTCACTTCGAAAAGTTATCAACTCCACAACTACTAACTATTGTGGCTGTGTTGATTGCTCTCCCTACAATGTGGATAAGAAATCTTTCTTCAATTTCATTTCTTTCCACGGTTGGGATTCTCATGTCGGTTGTCATTTTCGTGTCGTTGGCGGCCGCCACGGTTTTCGGAGGTGTTCTCACTAATCATAGCATACCGGTTTTTCAGATGCATAATGTTCCTTCAATTTCTGGCCTTTTTCTTTTCAGCTATGGAGGACACATTGTTTTCCCTAATTTATATAAAGCTATGAAGGACCCTTCAAAGTTTACTAAGGTCTCCATTGTGAGCTTCACAATTGTGACAGCACTATACATGATAATTGGGTTCCTAGGTGCAAAAATGTTTGGTCCTAATGTGAATTCTCAGTTCACTCTAAGCATGCCACCAAAGCAAATCATAACAAAGGTTGCTCTATGGGCCACAGTGTTAACCCCCATGACCAAATATGCACTTGAATTTGCACCTTTTGCAATTCACTTAGAGCATAAGCTNNNNNNNNNNTCAATGAGTGGAAGGACAAAAATGGTGATTAGGGGTTGTGCAGGTTCAATCTTCCTTTTGATCATACTTGCACTTGCTCTTTCAGTGCCTTATTTTGAGCATGTTCTTAGCCTCACTGGCTCTCTAGTTAGTGCAGCAGTTTCTTTGATTCTGCCATGTGCTTTCTATCTCAAGATCTTCTGGGGTCAAATAGCAAAGTCCCATTTGGTCCTAAACTTTTTTCTCATCACATTAGGGTTCTTTCTTGGGGTGATGGGAACTATTTCATCATCAAGATCATTGGTGGAGAGTTTTCAAGCACATCACTGA 1248 0.4135 MMMETKNDASDEDDEANSSFTHAVINMVGMLIGLGQLSTPYAVEQGGWAYSSTLLIGLGVMCTYTSHILGKCLRSYPTKLRSYADIGGQAFGSKGRILVSTFIYMEIFMALISYTISLHDNIVTVFLGTTLKLHFEKLSTPQLLTIVAVLIALPTMWIRNLSSISFLSTVGILMSVVIFVSLAAATVFGGVLTNHSIPVFQMHNVPSISGLFLFSYGGHIVFPNLYKAMKDPSKFTKVSIVSFTIVTALYMIIGFLGAKMFGPNVNSQFTLSMPPKQIITKVALWATVLTPMTKYALEFAPFAIHLEHKLXXXSMSGRTKMVIRGCAGSIFLLIILALALSVPYFEHVLSLTGSLVSAAVSLILPCAFYLKIFWGQIAKSHLVLNFFLITLGFFLGVMGTISSSRSLVESFQAHH 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241807g00002 415 Pfam Transmembrane amino acid transporter protein 17 401 IPR013057 -
Stsc241807g00002 415 PANTHER AMINO ACID TRANSPORTER 10 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241807g00002 Stsc-Chr241807 712 5034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241807g00002 12 415 Amino Acid or Auxin Permease AAAP Family AT5G16740 60.988 8.89e-158 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241807g00002 - - adu:107482339 680.633