Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241806g00013 | ATGGATTCATCTTCTTCCTCTTCATTAGATGTTCCCATAATCGAGCATGATCTCTTCATCAGCTTCAGAGGAGAAGACATTCGTACTAATTTTCTTGGCCATCTGCGAAAAGAACTGCACCGTAACCAGATCGATTTCTTTGTAGACGATGAAAAAGTTCACCCTGGAGATGACATTTCATCCAAGCTTCTTCAGGCCATTCAAGGATCTTTGATTTCATTAATCATCTTTTCGGAAAACTATGCCTCTTCAACTTGGTGCTTGAATGAACTTGTGAAAGTAATTGAATGCATGAAACAACATCAAAGGATTGTGATACCTGTTTTCTACAACGTTCTTCCCTCCGATGTGCGACATCAGAATAATTCTTTTAAGGAGGCTTTTGATAAATACCAACGCAGATTCAAGGGAGATACGACGAAGGTGCAAAGTTGGAGATCTGCTTTAAAGGAAGCTTCTAATTTATCTGGATTTCATTATCCATCGAAATCATCAAAATATCAAGATGAATCTAAATTTATTGAAGAAATTGTGAAAGATATTTTGGAGAAATTGTCAAATATTTTCTCAACAGAATCCACAGTTCTTGTTGGAATTGATGACATTTTTAGAAGTATTGAATCATTGTTGGCAATTGAATCAAGTGAAGTCCGAATCATAGGAATTTGGGGGATGGGAGGAATAGGTAAAACTACCATTGCCGAATTCTTATTTGACAAATATTCTTCCCAATATGAAGGCAGTCGTATGCTGAAAAATGTAAGAGAAGAATCACAAAAGTCTGGTGTGCCTCATTTATTTGAGAAACTTGTTTCTGAGTTATTGGAGGGAGAAAGTCTTCATTTGAAAGGATCATACAAAGCAAGATCCAGTTTTGTCCAGAGAAAGTTAAGTCGAAAAAAAGTTTTCATAGTCCTTGATGATATGGATACATTAGAACAGTTTGAACACCTTGCTACACAATGGTTGGGACCAGGTAGTAGGATCATTGTAACTACTAGAGACAAGCATGTCCTTGGAAAGGTTCATGGAATATATGAGGTCCAGGGCTTGAGCTTCGAAAATTCCCTGAAGCTTTTTTGCTTGAATGCTTTTGAGAAAGTCTATCCTGAAGCAGGATATGAAGAGGTTTCGAATATGGCAGTGAATTATGCAAATGGCATCCCATTGGCTTTAAAAGTTTTGGGTTCTTATTTATTCTCTAAAACCATAGAAGAATGGGAAAGTGCGTTGGCAAAACTCAAGATTTATCCTAATGTAGGCATTTGTAATGTGTTAAAGTTGAGTTATGATGGACTAGATGAGTTAGAGAGGGAGATATTTCTTGACATTGTATTCTTTTTCAAAGGAGAAAAAAAGGATGTTGTCATGCCATTTCTAGAATCGTGTGGTTTTTTCCCTGCTATCGGCATAGGCAATCTTTCTCGTAAAGCTCTTATAACTATTTCAAAGTATAATGAAATAGAAATGCATGACTTGATAAAACAAATGGGTCGAGAAATAGTCCGTCAAGAATCAATTAAAGACCCGGGAAGACGTAGCCGCTTGAGTAACACTGAGGATGTCTACAATGTATTGAATAATAATAAGGGAACAGACTCAGTTGAAGGCATTGTGTTGGACATGTCTGAAATTAAAAGAGATCTACATTTAGATGATGACACATTCAAGAGGATGCCTTATATAAGGTTTCTCAAATTTTACCATTCCGGGAGGGGTAGTCTTTTCCATTCCCGGAGGGGTACCACACCACCGAATGTGTATGTTTCTTCAACTTTGGAGTCATTTCCTAACGAACTAAGATACTTGGAGTGGAGTGGCTGCCCTGTGAAGTCTCTTCCTCCATCGTTTTGTGCTGAGAAGCTTGTTGAGCTTTCTATGCCACGGAGCAAAGTTTCTAAACTTTGGAATGGAGTTCAGGATCTTGTAAATTTAAAGAGGATTAACCTTAATGAATGCTGGGAGCTAGTGGAGCTTCCAGATTTTACTAAGGCATCAAACCTTGAAGAAGTATACCTCAAGAATTGTGTAAGCTTGTGTGAACTTCATCCATCCATTTTATCCAGCGACAAGCTTGGAACCTTAAATGTTTATGGTTGCAAAGAGCTTAAGAGTCTTAAAGGCAAGATTCATTTGAAATCTCTTACGATCCTCGATGTTCGTAATTGCTCAAACTTGAAAGAATTTTCAGTGTCATCAGAGGAACTAACAAGTTTGGATTTCCATTGGACAATAATTTATAAGTTGCACTCATCAGTTAGCCGTCTCAGCAAACTTGTGGAGTTTGATCTATATGGTGTGAGAGTTGAAGCTCTTCCAGAAGAACTGTGTCTCTTAGTATCTCTTGAGAAGCTAAATCTTGAAGGATGCAAACAGTTGGTTGAACTCCCTCAAAATATGAAGGCCTTATCACGGTTACATCATCTCAACATAGCGGATTGCTGCAACCTTCGATCTTTACCAGAGCTTCCACCATCTATTAAACATTTATCTGCTAACAACTGCACATCACTGGAGAAATTATTCAATGCAAAGGCAGTTTTAAGTTTAAATCTGATATCTATCTCATTTGAAAACTGTGTGAGGCTTGATGATGATTCATTCTTAGAATATGTGCATCATCCAATGATGGGAGTAGCAATTAGAAAGATGTTGGGTTGGATGGTGGAACGTAGCTTTACTCATGCCAGTTCCAGATTTGTTTACGACCCTAGTATCTTTTATCCCGGAAGCAAGGTTCCATCATGGTTCAAATATCAGACAAGAAGGAGTTCGGTAACTGTTGAACTTCTTGAGGATGAATCTCATTATCTGGATAGGCTAGTGGGTTTCATTTTGTGCTGTGTTGTTCATCATATTCCTTCTCAAAGAGAGGCTCCTCGAAAGCAGCCTCCCATGATCCAATGTAGATGCGGCGATCTATGGCTTAGTAAAAGGAGTGCTGAAACAAGTGGGTTGAGCTCAGATCATGTTTGTATATGGTTTGAACAAGTTGGTGGTGAACATGGATTGCGTGACAAGCATGTTACTTTTAATTTCAAGACTTATTACGGATCATGGGCATCATTCATTGAGTTTAAAGAAGCATGGGAGGTGATAGGGTGCGGGGTTTGCCCAGTATATGCCTCAGACGTTCTGGATGCCTTTCAAAATGTGGATGCAGAGTTTAAGTTCTTTTATGATAGAGGCAGACACGAATGGCTAAATCTTGTTGAAGCATCTGTTTTCACTCTTGACCAAGTGAAAACACTGCTGATTCACAAGATGGAACAACAAAAGGATGAAGAAGACGAAGAAGAGGAGGAGGAAGAAGTGGAATTATGGTCCAAAGGCTCTTATCCCTTTGACCGTTTTACAGATTCTATTTGA | 3369 | 0.3847 | MDSSSSSSLDVPIIEHDLFISFRGEDIRTNFLGHLRKELHRNQIDFFVDDEKVHPGDDISSKLLQAIQGSLISLIIFSENYASSTWCLNELVKVIECMKQHQRIVIPVFYNVLPSDVRHQNNSFKEAFDKYQRRFKGDTTKVQSWRSALKEASNLSGFHYPSKSSKYQDESKFIEEIVKDILEKLSNIFSTESTVLVGIDDIFRSIESLLAIESSEVRIIGIWGMGGIGKTTIAEFLFDKYSSQYEGSRMLKNVREESQKSGVPHLFEKLVSELLEGESLHLKGSYKARSSFVQRKLSRKKVFIVLDDMDTLEQFEHLATQWLGPGSRIIVTTRDKHVLGKVHGIYEVQGLSFENSLKLFCLNAFEKVYPEAGYEEVSNMAVNYANGIPLALKVLGSYLFSKTIEEWESALAKLKIYPNVGICNVLKLSYDGLDELEREIFLDIVFFFKGEKKDVVMPFLESCGFFPAIGIGNLSRKALITISKYNEIEMHDLIKQMGREIVRQESIKDPGRRSRLSNTEDVYNVLNNNKGTDSVEGIVLDMSEIKRDLHLDDDTFKRMPYIRFLKFYHSGRGSLFHSRRGTTPPNVYVSSTLESFPNELRYLEWSGCPVKSLPPSFCAEKLVELSMPRSKVSKLWNGVQDLVNLKRINLNECWELVELPDFTKASNLEEVYLKNCVSLCELHPSILSSDKLGTLNVYGCKELKSLKGKIHLKSLTILDVRNCSNLKEFSVSSEELTSLDFHWTIIYKLHSSVSRLSKLVEFDLYGVRVEALPEELCLLVSLEKLNLEGCKQLVELPQNMKALSRLHHLNIADCCNLRSLPELPPSIKHLSANNCTSLEKLFNAKAVLSLNLISISFENCVRLDDDSFLEYVHHPMMGVAIRKMLGWMVERSFTHASSRFVYDPSIFYPGSKVPSWFKYQTRRSSVTVELLEDESHYLDRLVGFILCCVVHHIPSQREAPRKQPPMIQCRCGDLWLSKRSAETSGLSSDHVCIWFEQVGGEHGLRDKHVTFNFKTYYGSWASFIEFKEAWEVIGCGVCPVYASDVLDAFQNVDAEFKFFYDRGRHEWLNLVEASVFTLDQVKTLLIHKMEQQKDEEDEEEEEEEVELWSKGSYPFDRFTDSI | 1122 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241806g00013 | 1122 | ProSiteProfiles | TIR domain profile. | 14 | 185 | IPR000157 | GO:0007165 | |
Stsc241806g00013 | 1122 | SUPERFAMILY | "Winged helix" DNA-binding domain | 422 | 526 | IPR036390 | - | |
Stsc241806g00013 | 1122 | Gene3D | Ribonuclease Inhibitor | 526 | 710 | IPR032675 | - | |
Stsc241806g00013 | 1122 | Gene3D | Ribonuclease Inhibitor | 711 | 854 | IPR032675 | - | |
Stsc241806g00013 | 1122 | SUPERFAMILY | L domain-like | 556 | 861 | - | - | |
Stsc241806g00013 | 1122 | Gene3D | - | 13 | 186 | IPR035897 | - | |
Stsc241806g00013 | 1122 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 16 | 731 | IPR044974 | GO:0006952 | |
Stsc241806g00013 | 1122 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 13 | 187 | - | - | |
Stsc241806g00013 | 1122 | FunFam | Disease resistance protein RPS4 | 532 | 734 | - | - | |
Stsc241806g00013 | 1122 | MobiDBLite | consensus disorder prediction | 1090 | 1122 | - | - | |
Stsc241806g00013 | 1122 | Pfam | NB-ARC domain | 206 | 415 | IPR002182 | GO:0043531 | |
Stsc241806g00013 | 1122 | Gene3D | - | 350 | 434 | IPR042197 | - | |
Stsc241806g00013 | 1122 | Pfam | Leucine Rich Repeat | 621 | 640 | IPR011713 | - | |
Stsc241806g00013 | 1122 | Pfam | C-JID domain | 908 | 1045 | IPR045344 | - | |
Stsc241806g00013 | 1122 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 6 | 158 | IPR035897 | - | |
Stsc241806g00013 | 1122 | Pfam | TIR domain | 16 | 197 | IPR000157 | GO:0007165 | |
Stsc241806g00013 | 1122 | Coils | Coil | 1082 | 1106 | - | - | |
Stsc241806g00013 | 1122 | Gene3D | - | 187 | 346 | IPR027417 | - | |
Stsc241806g00013 | 1122 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 188 | 444 | IPR027417 | - | |
Stsc241806g00013 | 1122 | SMART | till_3 | 15 | 155 | IPR000157 | GO:0007165 | |
Stsc241806g00013 | 1122 | PRINTS | Disease resistance protein signature | 219 | 234 | - | - | |
Stsc241806g00013 | 1122 | PRINTS | Disease resistance protein signature | 296 | 310 | - | - | |
Stsc241806g00013 | 1122 | PRINTS | Disease resistance protein signature | 710 | 726 | - | - | |
Stsc241806g00013 | 1122 | PRINTS | Disease resistance protein signature | 385 | 399 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241806g00013 | Stsc-Chr241806 | 58576 | 63582 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241806g00013 | 15 | 832 | WRKY Transcription Factor Family | AT4G12020 | 34.856 | 4.76e-114 | 388 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241806g00013 | - | - | ahf:112728432 | 1513.82 |